Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 SUDS3P1-201ENST00000505831 966 ntBASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 AC142381.2-201ENST00000566120 298 ntBASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 AL358852.1-201ENST00000623174 1268 ntBASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 AC005224.4-201ENST00000583262 1652 ntBASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-4A0A0B4J246 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-4A0A0B4J246 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 AC012414.1-201ENST00000556676 535 ntBASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 AL031432.3-201ENST00000607698 485 ntBASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-4A0A0B4J246 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 AC055733.4-201ENST00000638462 1354 ntBASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms