Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCDHAC2Q9Y5I4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PCDHAC2Q9Y5I4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.91■■■□□ 2.7
PCDHAC2Q9Y5I4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.9■■■□□ 2.7
PCDHAC2Q9Y5I4 HSD17B1P1-201ENST00000590052 955 ntBASIC31.9■■■□□ 2.7
PCDHAC2Q9Y5I4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCDHAC2Q9Y5I4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.87■■■□□ 2.69
PCDHAC2Q9Y5I4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDHAC2Q9Y5I4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDHAC2Q9Y5I4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCDHAC2Q9Y5I4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PCDHAC2Q9Y5I4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCDHAC2Q9Y5I4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.86■■■□□ 2.69
PCDHAC2Q9Y5I4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHAC2Q9Y5I4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHAC2Q9Y5I4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHAC2Q9Y5I4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.85■■■□□ 2.69
PCDHAC2Q9Y5I4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
PCDHAC2Q9Y5I4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.82■■■□□ 2.69
PCDHAC2Q9Y5I4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.82■■■□□ 2.68
PCDHAC2Q9Y5I4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PCDHAC2Q9Y5I4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDHAC2Q9Y5I4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PCDHAC2Q9Y5I4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCDHAC2Q9Y5I4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.8■■■□□ 2.68
PCDHAC2Q9Y5I4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCDHAC2Q9Y5I4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.79■■■□□ 2.68
PCDHAC2Q9Y5I4 AL161658.1-201ENST00000623641 1967 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L13-201ENST00000554103 1267 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L15-201ENST00000611059 1267 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L23-201ENST00000615195 1269 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L24-201ENST00000617576 1269 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L22-201ENST00000618238 1269 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L20-201ENST00000619712 1269 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L21-201ENST00000622058 1269 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L10-201ENST00000622460 1267 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 DUX4L25-201ENST00000624915 1269 ntBASIC31.78■■■□□ 2.68
PCDHAC2Q9Y5I4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.76■■■□□ 2.67
PCDHAC2Q9Y5I4 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.76■■■□□ 2.67
PCDHAC2Q9Y5I4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.76■■■□□ 2.67
PCDHAC2Q9Y5I4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PCDHAC2Q9Y5I4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCDHAC2Q9Y5I4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PCDHAC2Q9Y5I4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCDHAC2Q9Y5I4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PCDHAC2Q9Y5I4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PCDHAC2Q9Y5I4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PCDHAC2Q9Y5I4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PCDHAC2Q9Y5I4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.72■■■□□ 2.67
PCDHAC2Q9Y5I4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PCDHAC2Q9Y5I4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.71■■■□□ 2.67
PCDHAC2Q9Y5I4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.71■■■□□ 2.67
PCDHAC2Q9Y5I4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PCDHAC2Q9Y5I4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
PCDHAC2Q9Y5I4 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.7■■■□□ 2.67
PCDHAC2Q9Y5I4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.7■■■□□ 2.67
PCDHAC2Q9Y5I4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PCDHAC2Q9Y5I4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PCDHAC2Q9Y5I4 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.69■■■□□ 2.66
PCDHAC2Q9Y5I4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.69■■■□□ 2.66
PCDHAC2Q9Y5I4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.69■■■□□ 2.66
PCDHAC2Q9Y5I4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PCDHAC2Q9Y5I4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
PCDHAC2Q9Y5I4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PCDHAC2Q9Y5I4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PCDHAC2Q9Y5I4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
PCDHAC2Q9Y5I4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PCDHAC2Q9Y5I4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PCDHAC2Q9Y5I4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PCDHAC2Q9Y5I4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PCDHAC2Q9Y5I4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PCDHAC2Q9Y5I4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.62■■■□□ 2.65
PCDHAC2Q9Y5I4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.61■■■□□ 2.65
PCDHAC2Q9Y5I4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.59■■■□□ 2.65
PCDHAC2Q9Y5I4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.57■■■□□ 2.64
PCDHAC2Q9Y5I4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.57■■■□□ 2.64
PCDHAC2Q9Y5I4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PCDHAC2Q9Y5I4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.56■■■□□ 2.64
PCDHAC2Q9Y5I4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PCDHAC2Q9Y5I4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.55■■■□□ 2.64
PCDHAC2Q9Y5I4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
PCDHAC2Q9Y5I4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDHAC2Q9Y5I4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDHAC2Q9Y5I4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PCDHAC2Q9Y5I4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.53■■■□□ 2.64
PCDHAC2Q9Y5I4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
PCDHAC2Q9Y5I4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
PCDHAC2Q9Y5I4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
PCDHAC2Q9Y5I4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
PCDHAC2Q9Y5I4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.51■■■□□ 2.63
PCDHAC2Q9Y5I4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PCDHAC2Q9Y5I4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.5■■■□□ 2.63
PCDHAC2Q9Y5I4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCDHAC2Q9Y5I4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PCDHAC2Q9Y5I4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PCDHAC2Q9Y5I4 AC010864.1-201ENST00000609407 1511 ntBASIC31.48■■■□□ 2.63
PCDHAC2Q9Y5I4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.47■■■□□ 2.63
PCDHAC2Q9Y5I4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms