Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
LEMD3Q9Y2U8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
LEMD3Q9Y2U8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LEMD3Q9Y2U8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
LEMD3Q9Y2U8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
LEMD3Q9Y2U8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.5■■■□□ 2.79
LEMD3Q9Y2U8 CR559946.2-201ENST00000623684 991 ntBASIC32.5■■■□□ 2.79
LEMD3Q9Y2U8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
LEMD3Q9Y2U8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
LEMD3Q9Y2U8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
LEMD3Q9Y2U8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
LEMD3Q9Y2U8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
LEMD3Q9Y2U8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
LEMD3Q9Y2U8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.47■■■□□ 2.79
LEMD3Q9Y2U8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
LEMD3Q9Y2U8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
LEMD3Q9Y2U8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
LEMD3Q9Y2U8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.45■■■□□ 2.79
LEMD3Q9Y2U8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
LEMD3Q9Y2U8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
LEMD3Q9Y2U8 AL161658.1-201ENST00000623641 1967 ntBASIC32.44■■■□□ 2.78
LEMD3Q9Y2U8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
LEMD3Q9Y2U8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.43■■■□□ 2.78
LEMD3Q9Y2U8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
LEMD3Q9Y2U8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.43■■■□□ 2.78
LEMD3Q9Y2U8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.43■■■□□ 2.78
LEMD3Q9Y2U8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
LEMD3Q9Y2U8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.43■■■□□ 2.78
LEMD3Q9Y2U8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.43■■■□□ 2.78
LEMD3Q9Y2U8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
LEMD3Q9Y2U8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.41■■■□□ 2.78
LEMD3Q9Y2U8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
LEMD3Q9Y2U8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
LEMD3Q9Y2U8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.37■■■□□ 2.77
LEMD3Q9Y2U8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
LEMD3Q9Y2U8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
LEMD3Q9Y2U8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
LEMD3Q9Y2U8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
LEMD3Q9Y2U8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L13-201ENST00000554103 1267 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L15-201ENST00000611059 1267 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L23-201ENST00000615195 1269 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L24-201ENST00000617576 1269 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L22-201ENST00000618238 1269 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L20-201ENST00000619712 1269 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L21-201ENST00000622058 1269 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L10-201ENST00000622460 1267 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 DUX4L25-201ENST00000624915 1269 ntBASIC32.34■■■□□ 2.77
LEMD3Q9Y2U8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
LEMD3Q9Y2U8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
LEMD3Q9Y2U8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
LEMD3Q9Y2U8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.3■■■□□ 2.76
LEMD3Q9Y2U8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
LEMD3Q9Y2U8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.29■■■□□ 2.76
LEMD3Q9Y2U8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.29■■■□□ 2.76
LEMD3Q9Y2U8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.29■■■□□ 2.76
LEMD3Q9Y2U8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LEMD3Q9Y2U8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LEMD3Q9Y2U8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
LEMD3Q9Y2U8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.28■■■□□ 2.76
LEMD3Q9Y2U8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LEMD3Q9Y2U8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.27■■■□□ 2.76
LEMD3Q9Y2U8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
LEMD3Q9Y2U8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
LEMD3Q9Y2U8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
LEMD3Q9Y2U8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.25■■■□□ 2.75
LEMD3Q9Y2U8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.24■■■□□ 2.75
LEMD3Q9Y2U8 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.24■■■□□ 2.75
LEMD3Q9Y2U8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.24■■■□□ 2.75
LEMD3Q9Y2U8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
LEMD3Q9Y2U8 AC010864.1-201ENST00000609407 1511 ntBASIC32.21■■■□□ 2.75
LEMD3Q9Y2U8 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.21■■■□□ 2.75
LEMD3Q9Y2U8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
LEMD3Q9Y2U8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.75
LEMD3Q9Y2U8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.2■■■□□ 2.74
LEMD3Q9Y2U8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
LEMD3Q9Y2U8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
LEMD3Q9Y2U8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.18■■■□□ 2.74
LEMD3Q9Y2U8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.18■■■□□ 2.74
LEMD3Q9Y2U8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
LEMD3Q9Y2U8 LINC00273-201ENST00000539813 1452 ntBASIC32.16■■■□□ 2.74
LEMD3Q9Y2U8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.15■■■□□ 2.74
LEMD3Q9Y2U8 HSD17B1P1-201ENST00000590052 955 ntBASIC32.15■■■□□ 2.74
LEMD3Q9Y2U8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
LEMD3Q9Y2U8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
LEMD3Q9Y2U8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.14■■■□□ 2.74
LEMD3Q9Y2U8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.14■■■□□ 2.74
LEMD3Q9Y2U8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.14■■■□□ 2.74
LEMD3Q9Y2U8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.14■■■□□ 2.74
LEMD3Q9Y2U8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
LEMD3Q9Y2U8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
LEMD3Q9Y2U8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
LEMD3Q9Y2U8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.13■■■□□ 2.73
LEMD3Q9Y2U8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
LEMD3Q9Y2U8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LEMD3Q9Y2U8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
LEMD3Q9Y2U8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
LEMD3Q9Y2U8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
LEMD3Q9Y2U8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms