Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBQLN1Q9UMX0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBQLN1Q9UMX0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.46■■■□□ 2.15
UBQLN1Q9UMX0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
UBQLN1Q9UMX0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
UBQLN1Q9UMX0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
UBQLN1Q9UMX0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.44■■■□□ 2.14
UBQLN1Q9UMX0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.44■■■□□ 2.14
UBQLN1Q9UMX0 AC010864.1-201ENST00000609407 1511 ntBASIC28.43■■■□□ 2.14
UBQLN1Q9UMX0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
UBQLN1Q9UMX0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBQLN1Q9UMX0 AC021231.2-201ENST00000594613 730 ntBASIC28.42■■■□□ 2.14
UBQLN1Q9UMX0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBQLN1Q9UMX0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
UBQLN1Q9UMX0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
UBQLN1Q9UMX0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
UBQLN1Q9UMX0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
UBQLN1Q9UMX0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBQLN1Q9UMX0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBQLN1Q9UMX0 ZNRF2P2-203ENST00000454624 420 ntBASIC28.37■■■□□ 2.13
UBQLN1Q9UMX0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
UBQLN1Q9UMX0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
UBQLN1Q9UMX0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 AL135925.1-201ENST00000605920 1701 ntBASIC28.35■■■□□ 2.13
UBQLN1Q9UMX0 MIR7108-201ENST00000614319 87 ntBASIC28.34■■■□□ 2.13
UBQLN1Q9UMX0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.33■■■□□ 2.13
UBQLN1Q9UMX0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.33■■■□□ 2.13
UBQLN1Q9UMX0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
UBQLN1Q9UMX0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
UBQLN1Q9UMX0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
UBQLN1Q9UMX0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
UBQLN1Q9UMX0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.31■■■□□ 2.12
UBQLN1Q9UMX0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
UBQLN1Q9UMX0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.3■■■□□ 2.12
UBQLN1Q9UMX0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
UBQLN1Q9UMX0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.29■■■□□ 2.12
UBQLN1Q9UMX0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
UBQLN1Q9UMX0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
UBQLN1Q9UMX0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
UBQLN1Q9UMX0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
UBQLN1Q9UMX0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.27■■■□□ 2.12
UBQLN1Q9UMX0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.27■■■□□ 2.12
UBQLN1Q9UMX0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
UBQLN1Q9UMX0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
UBQLN1Q9UMX0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.25■■■□□ 2.11
UBQLN1Q9UMX0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
UBQLN1Q9UMX0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
UBQLN1Q9UMX0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
UBQLN1Q9UMX0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
UBQLN1Q9UMX0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
UBQLN1Q9UMX0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
UBQLN1Q9UMX0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
UBQLN1Q9UMX0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.2■■■□□ 2.1
UBQLN1Q9UMX0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
UBQLN1Q9UMX0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.19■■■□□ 2.1
UBQLN1Q9UMX0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
UBQLN1Q9UMX0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
UBQLN1Q9UMX0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
UBQLN1Q9UMX0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
UBQLN1Q9UMX0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
UBQLN1Q9UMX0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBQLN1Q9UMX0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBQLN1Q9UMX0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.15■■■□□ 2.1
UBQLN1Q9UMX0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.15■■■□□ 2.1
UBQLN1Q9UMX0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
UBQLN1Q9UMX0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.14■■■□□ 2.1
UBQLN1Q9UMX0 LINC01971-201ENST00000617888 1048 ntBASIC28.14■■■□□ 2.1
UBQLN1Q9UMX0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
UBQLN1Q9UMX0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
UBQLN1Q9UMX0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.12■■■□□ 2.09
UBQLN1Q9UMX0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
UBQLN1Q9UMX0 AC127502.1-201ENST00000399971 1502 ntBASIC28.1■■■□□ 2.09
UBQLN1Q9UMX0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
UBQLN1Q9UMX0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 ST7-AS1-201ENST00000456775 1889 ntBASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
UBQLN1Q9UMX0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.08■■■□□ 2.09
UBQLN1Q9UMX0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBQLN1Q9UMX0 LINC00273-201ENST00000539813 1452 ntBASIC28.08■■■□□ 2.09
UBQLN1Q9UMX0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms