Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.64■■□□□ 1.7
LRIT1Q9P2V4 LINC01971-201ENST00000617888 1048 ntBASIC25.64■■□□□ 1.7
LRIT1Q9P2V4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LRIT1Q9P2V4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.69
LRIT1Q9P2V4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LRIT1Q9P2V4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRIT1Q9P2V4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRIT1Q9P2V4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LRIT1Q9P2V4 DUX4L11-201ENST00000611504 1267 ntBASIC25.62■■□□□ 1.69
LRIT1Q9P2V4 DUX4L12-201ENST00000614593 1267 ntBASIC25.62■■□□□ 1.69
LRIT1Q9P2V4 DUX4L14-201ENST00000621227 1267 ntBASIC25.62■■□□□ 1.69
LRIT1Q9P2V4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LRIT1Q9P2V4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LRIT1Q9P2V4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LRIT1Q9P2V4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.6■■□□□ 1.69
LRIT1Q9P2V4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.6■■□□□ 1.69
LRIT1Q9P2V4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.59■■□□□ 1.69
LRIT1Q9P2V4 MIR3648-2-201ENST00000581792 180 ntBASIC25.59■■□□□ 1.69
LRIT1Q9P2V4 MIR3648-1-201ENST00000615959 180 ntBASIC25.59■■□□□ 1.69
LRIT1Q9P2V4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
LRIT1Q9P2V4 MIR639-201ENST00000384974 98 ntBASIC25.58■■□□□ 1.69
LRIT1Q9P2V4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.58■■□□□ 1.69
LRIT1Q9P2V4 AC016575.1-201ENST00000607026 382 ntBASIC25.58■■□□□ 1.69
LRIT1Q9P2V4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRIT1Q9P2V4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.57■■□□□ 1.68
LRIT1Q9P2V4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
LRIT1Q9P2V4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.56■■□□□ 1.68
LRIT1Q9P2V4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.56■■□□□ 1.68
LRIT1Q9P2V4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.56■■□□□ 1.68
LRIT1Q9P2V4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.56■■□□□ 1.68
LRIT1Q9P2V4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.56■■□□□ 1.68
LRIT1Q9P2V4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LRIT1Q9P2V4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.55■■□□□ 1.68
LRIT1Q9P2V4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LRIT1Q9P2V4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LRIT1Q9P2V4 MIR4449-201ENST00000578365 66 ntBASIC25.54■■□□□ 1.68
LRIT1Q9P2V4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
LRIT1Q9P2V4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.52■■□□□ 1.68
LRIT1Q9P2V4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
LRIT1Q9P2V4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
LRIT1Q9P2V4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.51■■□□□ 1.67
LRIT1Q9P2V4 CR559946.2-201ENST00000623684 991 ntBASIC25.51■■□□□ 1.67
LRIT1Q9P2V4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LRIT1Q9P2V4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LRIT1Q9P2V4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
LRIT1Q9P2V4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
LRIT1Q9P2V4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.48■■□□□ 1.67
LRIT1Q9P2V4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LRIT1Q9P2V4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.47■■□□□ 1.67
LRIT1Q9P2V4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LRIT1Q9P2V4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.46■■□□□ 1.67
LRIT1Q9P2V4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LRIT1Q9P2V4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
LRIT1Q9P2V4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LRIT1Q9P2V4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LRIT1Q9P2V4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
LRIT1Q9P2V4 AC010864.1-201ENST00000609407 1511 ntBASIC25.43■■□□□ 1.66
LRIT1Q9P2V4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.43■■□□□ 1.66
LRIT1Q9P2V4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LRIT1Q9P2V4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LRIT1Q9P2V4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L13-201ENST00000554103 1267 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L15-201ENST00000611059 1267 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L23-201ENST00000615195 1269 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L24-201ENST00000617576 1269 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L22-201ENST00000618238 1269 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L20-201ENST00000619712 1269 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L21-201ENST00000622058 1269 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L10-201ENST00000622460 1267 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 DUX4L25-201ENST00000624915 1269 ntBASIC25.42■■□□□ 1.66
LRIT1Q9P2V4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
LRIT1Q9P2V4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRIT1Q9P2V4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRIT1Q9P2V4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRIT1Q9P2V4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRIT1Q9P2V4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.4■■□□□ 1.66
LRIT1Q9P2V4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
LRIT1Q9P2V4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRIT1Q9P2V4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRIT1Q9P2V4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRIT1Q9P2V4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
LRIT1Q9P2V4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.39■■□□□ 1.65
LRIT1Q9P2V4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRIT1Q9P2V4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRIT1Q9P2V4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LRIT1Q9P2V4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
LRIT1Q9P2V4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRIT1Q9P2V4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LRIT1Q9P2V4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
LRIT1Q9P2V4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LRIT1Q9P2V4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRIT1Q9P2V4 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.36■■□□□ 1.65
LRIT1Q9P2V4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
LRIT1Q9P2V4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRIT1Q9P2V4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.34■■□□□ 1.65
LRIT1Q9P2V4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LRIT1Q9P2V4 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms