Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
MMP25Q9NPA2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
MMP25Q9NPA2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.58■■□□□ 1.53
MMP25Q9NPA2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.57■■□□□ 1.52
MMP25Q9NPA2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
MMP25Q9NPA2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
MMP25Q9NPA2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
MMP25Q9NPA2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
MMP25Q9NPA2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.56■■□□□ 1.52
MMP25Q9NPA2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP25Q9NPA2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.56■■□□□ 1.52
MMP25Q9NPA2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP25Q9NPA2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP25Q9NPA2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP25Q9NPA2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
MMP25Q9NPA2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.55■■□□□ 1.52
MMP25Q9NPA2 MIR7108-201ENST00000614319 87 ntBASIC24.55■■□□□ 1.52
MMP25Q9NPA2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
MMP25Q9NPA2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MMP25Q9NPA2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.54■■□□□ 1.52
MMP25Q9NPA2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MMP25Q9NPA2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MMP25Q9NPA2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MMP25Q9NPA2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MMP25Q9NPA2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MMP25Q9NPA2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
MMP25Q9NPA2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MMP25Q9NPA2 ZNRF2P2-203ENST00000454624 420 ntBASIC24.53■■□□□ 1.52
MMP25Q9NPA2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
MMP25Q9NPA2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.53■■□□□ 1.52
MMP25Q9NPA2 AC021231.2-201ENST00000594613 730 ntBASIC24.52■■□□□ 1.52
MMP25Q9NPA2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MMP25Q9NPA2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MMP25Q9NPA2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MMP25Q9NPA2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
MMP25Q9NPA2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
MMP25Q9NPA2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MMP25Q9NPA2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.49■■□□□ 1.51
MMP25Q9NPA2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
MMP25Q9NPA2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MMP25Q9NPA2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
MMP25Q9NPA2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.48■■□□□ 1.51
MMP25Q9NPA2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MMP25Q9NPA2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MMP25Q9NPA2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.46■■□□□ 1.51
MMP25Q9NPA2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MMP25Q9NPA2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
MMP25Q9NPA2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.44■■□□□ 1.5
MMP25Q9NPA2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
MMP25Q9NPA2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
MMP25Q9NPA2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
MMP25Q9NPA2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.42■■□□□ 1.5
MMP25Q9NPA2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MMP25Q9NPA2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
MMP25Q9NPA2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MMP25Q9NPA2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.4■■□□□ 1.5
MMP25Q9NPA2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
MMP25Q9NPA2 AC010864.1-201ENST00000609407 1511 ntBASIC24.4■■□□□ 1.5
MMP25Q9NPA2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
MMP25Q9NPA2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.39■■□□□ 1.49
MMP25Q9NPA2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.38■■□□□ 1.49
MMP25Q9NPA2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
MMP25Q9NPA2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
MMP25Q9NPA2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
MMP25Q9NPA2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.37■■□□□ 1.49
MMP25Q9NPA2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.36■■□□□ 1.49
MMP25Q9NPA2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MMP25Q9NPA2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.36■■□□□ 1.49
MMP25Q9NPA2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MMP25Q9NPA2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MMP25Q9NPA2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.35■■□□□ 1.49
MMP25Q9NPA2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
MMP25Q9NPA2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MMP25Q9NPA2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MMP25Q9NPA2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MMP25Q9NPA2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
MMP25Q9NPA2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.33■■□□□ 1.49
MMP25Q9NPA2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
MMP25Q9NPA2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
MMP25Q9NPA2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MMP25Q9NPA2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
MMP25Q9NPA2 LINC01971-201ENST00000617888 1048 ntBASIC24.3■■□□□ 1.48
MMP25Q9NPA2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
MMP25Q9NPA2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.29■■□□□ 1.48
MMP25Q9NPA2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
MMP25Q9NPA2 ABCB10P1-201ENST00000614297 2181 ntBASIC24.29■■□□□ 1.48
MMP25Q9NPA2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
MMP25Q9NPA2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
MMP25Q9NPA2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
MMP25Q9NPA2 AL135925.1-201ENST00000605920 1701 ntBASIC24.27■■□□□ 1.48
MMP25Q9NPA2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
MMP25Q9NPA2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
MMP25Q9NPA2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.26■■□□□ 1.47
MMP25Q9NPA2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.25■■□□□ 1.47
MMP25Q9NPA2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.24■■□□□ 1.47
MMP25Q9NPA2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
MMP25Q9NPA2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.23■■□□□ 1.47
MMP25Q9NPA2 DUX4L11-201ENST00000611504 1267 ntBASIC24.23■■□□□ 1.47
MMP25Q9NPA2 DUX4L12-201ENST00000614593 1267 ntBASIC24.23■■□□□ 1.47
MMP25Q9NPA2 DUX4L14-201ENST00000621227 1267 ntBASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms