Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Q9N2K0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Q9N2K0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Q9N2K0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Q9N2K0 AC142086.6-201ENST00000621154 1765 ntBASIC21.94■■□□□ 1.1
Q9N2K0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.94■■□□□ 1.1
Q9N2K0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Q9N2K0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Q9N2K0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.91■■□□□ 1.1
Q9N2K0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Q9N2K0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.91■■□□□ 1.1
Q9N2K0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.91■■□□□ 1.1
Q9N2K0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.9■■□□□ 1.1
Q9N2K0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Q9N2K0 AC010864.1-201ENST00000609407 1511 ntBASIC21.9■■□□□ 1.1
Q9N2K0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Q9N2K0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Q9N2K0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.89■■□□□ 1.09
Q9N2K0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Q9N2K0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Q9N2K0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Q9N2K0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Q9N2K0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Q9N2K0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Q9N2K0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Q9N2K0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9N2K0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.87■■□□□ 1.09
Q9N2K0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Q9N2K0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9N2K0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9N2K0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Q9N2K0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Q9N2K0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.85■■□□□ 1.09
Q9N2K0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.84■■□□□ 1.09
Q9N2K0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Q9N2K0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.83■■□□□ 1.09
Q9N2K0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Q9N2K0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.83■■□□□ 1.08
Q9N2K0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Q9N2K0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q9N2K0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q9N2K0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Q9N2K0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q9N2K0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
Q9N2K0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Q9N2K0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Q9N2K0 DRD5P2-201ENST00000421395 2012 ntBASIC21.81■■□□□ 1.08
Q9N2K0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Q9N2K0 RARRES2P7-201ENST00000567349 469 ntBASIC21.81■■□□□ 1.08
Q9N2K0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q9N2K0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q9N2K0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Q9N2K0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.8■■□□□ 1.08
Q9N2K0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Q9N2K0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q9N2K0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q9N2K0 SETD8P1-201ENST00000623146 1180 ntBASIC21.79■■□□□ 1.08
Q9N2K0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Q9N2K0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Q9N2K0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.78■■□□□ 1.08
Q9N2K0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Q9N2K0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Q9N2K0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.78■■□□□ 1.08
Q9N2K0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.78■■□□□ 1.08
Q9N2K0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q9N2K0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Q9N2K0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Q9N2K0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q9N2K0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q9N2K0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Q9N2K0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q9N2K0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q9N2K0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Q9N2K0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.75■■□□□ 1.07
Q9N2K0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Q9N2K0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.73■■□□□ 1.07
Q9N2K0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Q9N2K0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Q9N2K0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Q9N2K0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Q9N2K0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.72■■□□□ 1.07
Q9N2K0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Q9N2K0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Q9N2K0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Q9N2K0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Q9N2K0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Q9N2K0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Q9N2K0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Q9N2K0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.69■■□□□ 1.06
Q9N2K0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Q9N2K0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Q9N2K0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Q9N2K0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.68■■□□□ 1.06
Q9N2K0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Q9N2K0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.66■■□□□ 1.06
Q9N2K0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Q9N2K0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.66■■□□□ 1.06
Q9N2K0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Q9N2K0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Q9N2K0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms