Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
UPF2Q9HAU5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
UPF2Q9HAU5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
UPF2Q9HAU5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
UPF2Q9HAU5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
UPF2Q9HAU5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
UPF2Q9HAU5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
UPF2Q9HAU5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.03■■■□□ 2.72
UPF2Q9HAU5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
UPF2Q9HAU5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
UPF2Q9HAU5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
UPF2Q9HAU5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.01■■■□□ 2.71
UPF2Q9HAU5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32■■■□□ 2.71
UPF2Q9HAU5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
UPF2Q9HAU5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
UPF2Q9HAU5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32■■■□□ 2.71
UPF2Q9HAU5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC32■■■□□ 2.71
UPF2Q9HAU5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
UPF2Q9HAU5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
UPF2Q9HAU5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
UPF2Q9HAU5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
UPF2Q9HAU5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
UPF2Q9HAU5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.97■■■□□ 2.71
UPF2Q9HAU5 DRD5P2-201ENST00000421395 2012 ntBASIC31.97■■■□□ 2.71
UPF2Q9HAU5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
UPF2Q9HAU5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
UPF2Q9HAU5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
UPF2Q9HAU5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
UPF2Q9HAU5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
UPF2Q9HAU5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.9■■■□□ 2.7
UPF2Q9HAU5 WASH5P-204ENST00000632292 975 ntBASIC31.9■■■□□ 2.7
UPF2Q9HAU5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
UPF2Q9HAU5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
UPF2Q9HAU5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.88■■■□□ 2.69
UPF2Q9HAU5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
UPF2Q9HAU5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
UPF2Q9HAU5 AP002365.1-201ENST00000603448 772 ntBASIC31.88■■■□□ 2.69
UPF2Q9HAU5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
UPF2Q9HAU5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
UPF2Q9HAU5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.86■■■□□ 2.69
UPF2Q9HAU5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.86■■■□□ 2.69
UPF2Q9HAU5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
UPF2Q9HAU5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.83■■■□□ 2.69
UPF2Q9HAU5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
UPF2Q9HAU5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
UPF2Q9HAU5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.82■■■□□ 2.68
UPF2Q9HAU5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
UPF2Q9HAU5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
UPF2Q9HAU5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
UPF2Q9HAU5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
UPF2Q9HAU5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
UPF2Q9HAU5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
UPF2Q9HAU5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
UPF2Q9HAU5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF2Q9HAU5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF2Q9HAU5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF2Q9HAU5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF2Q9HAU5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
UPF2Q9HAU5 AL121749.1-202ENST00000609313 2153 ntBASIC31.74■■■□□ 2.67
UPF2Q9HAU5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
UPF2Q9HAU5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
UPF2Q9HAU5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
UPF2Q9HAU5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
UPF2Q9HAU5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
UPF2Q9HAU5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
UPF2Q9HAU5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
UPF2Q9HAU5 AC010864.1-201ENST00000609407 1511 ntBASIC31.72■■■□□ 2.67
UPF2Q9HAU5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
UPF2Q9HAU5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
UPF2Q9HAU5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
UPF2Q9HAU5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
UPF2Q9HAU5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
UPF2Q9HAU5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.7■■■□□ 2.66
UPF2Q9HAU5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
UPF2Q9HAU5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
UPF2Q9HAU5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
UPF2Q9HAU5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
UPF2Q9HAU5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
UPF2Q9HAU5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
UPF2Q9HAU5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
UPF2Q9HAU5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
UPF2Q9HAU5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
UPF2Q9HAU5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
UPF2Q9HAU5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms