Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
CHMP4BQ9H444 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
CHMP4BQ9H444 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CHMP4BQ9H444 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CHMP4BQ9H444 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CHMP4BQ9H444 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CHMP4BQ9H444 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CHMP4BQ9H444 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
CHMP4BQ9H444 MIR762-201ENST00000390236 83 ntBASIC33.15■■■□□ 2.9
CHMP4BQ9H444 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CHMP4BQ9H444 SUZ12P1-203ENST00000578195 985 ntBASIC33.15■■■□□ 2.9
CHMP4BQ9H444 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CHMP4BQ9H444 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CHMP4BQ9H444 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.14■■■□□ 2.9
CHMP4BQ9H444 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CHMP4BQ9H444 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
CHMP4BQ9H444 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CHMP4BQ9H444 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CHMP4BQ9H444 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
CHMP4BQ9H444 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC33.11■■■□□ 2.89
CHMP4BQ9H444 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CHMP4BQ9H444 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CHMP4BQ9H444 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CHMP4BQ9H444 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHMP4BQ9H444 HNRNPLP2-201ENST00000568980 1570 ntBASIC33.07■■■□□ 2.88
CHMP4BQ9H444 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHMP4BQ9H444 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHMP4BQ9H444 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHMP4BQ9H444 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CHMP4BQ9H444 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CHMP4BQ9H444 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
CHMP4BQ9H444 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CHMP4BQ9H444 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC33.04■■■□□ 2.88
CHMP4BQ9H444 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CHMP4BQ9H444 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC33.04■■■□□ 2.88
CHMP4BQ9H444 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC33.04■■■□□ 2.88
CHMP4BQ9H444 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC33.03■■■□□ 2.88
CHMP4BQ9H444 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC33.03■■■□□ 2.88
CHMP4BQ9H444 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC33.02■■■□□ 2.88
CHMP4BQ9H444 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CHMP4BQ9H444 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
CHMP4BQ9H444 RPS2-209ENST00000529806 993 ntTSL 3 BASIC33■■■□□ 2.87
CHMP4BQ9H444 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
CHMP4BQ9H444 AC005559.1-201ENST00000589661 871 ntBASIC32.99■■■□□ 2.87
CHMP4BQ9H444 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CHMP4BQ9H444 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.99■■■□□ 2.87
CHMP4BQ9H444 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.99■■■□□ 2.87
CHMP4BQ9H444 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
CHMP4BQ9H444 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.97■■■□□ 2.87
CHMP4BQ9H444 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
CHMP4BQ9H444 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
CHMP4BQ9H444 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CHMP4BQ9H444 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.95■■■□□ 2.87
CHMP4BQ9H444 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.95■■■□□ 2.87
CHMP4BQ9H444 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
CHMP4BQ9H444 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.86
CHMP4BQ9H444 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CHMP4BQ9H444 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CHMP4BQ9H444 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CHMP4BQ9H444 AL139393.2-201ENST00000608721 2025 ntBASIC32.92■■■□□ 2.86
CHMP4BQ9H444 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
CHMP4BQ9H444 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
CHMP4BQ9H444 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
CHMP4BQ9H444 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CHMP4BQ9H444 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.9■■■□□ 2.86
CHMP4BQ9H444 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CHMP4BQ9H444 AC139426.1-201ENST00000568218 2529 ntBASIC32.89■■■□□ 2.86
CHMP4BQ9H444 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CHMP4BQ9H444 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.88■■■□□ 2.85
CHMP4BQ9H444 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
CHMP4BQ9H444 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
CHMP4BQ9H444 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
CHMP4BQ9H444 MIR3665-201ENST00000578708 105 ntBASIC32.86■■■□□ 2.85
CHMP4BQ9H444 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.86■■■□□ 2.85
CHMP4BQ9H444 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CHMP4BQ9H444 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CHMP4BQ9H444 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CHMP4BQ9H444 AP006261.1-201ENST00000584783 668 ntBASIC32.85■■■□□ 2.85
CHMP4BQ9H444 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.84■■■□□ 2.85
CHMP4BQ9H444 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHMP4BQ9H444 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHMP4BQ9H444 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHMP4BQ9H444 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CHMP4BQ9H444 AP004833.2-201ENST00000532228 1454 ntBASIC32.82■■■□□ 2.84
CHMP4BQ9H444 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
CHMP4BQ9H444 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CHMP4BQ9H444 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
CHMP4BQ9H444 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.81■■■□□ 2.84
CHMP4BQ9H444 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.81■■■□□ 2.84
CHMP4BQ9H444 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
CHMP4BQ9H444 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHMP4BQ9H444 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.79■■■□□ 2.84
CHMP4BQ9H444 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.79■■■□□ 2.84
CHMP4BQ9H444 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.79■■■□□ 2.84
CHMP4BQ9H444 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHMP4BQ9H444 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHMP4BQ9H444 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.78■■■□□ 2.84
CHMP4BQ9H444 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.78■■■□□ 2.84
CHMP4BQ9H444 AC127502.1-201ENST00000399971 1502 ntBASIC32.77■■■□□ 2.84
CHMP4BQ9H444 AC108673.1-201ENST00000510422 1159 ntBASIC32.77■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms