Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDC42EP4Q9H3Q1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDC42EP4Q9H3Q1 AP002365.1-201ENST00000603448 772 ntBASIC26.76■■□□□ 1.87
CDC42EP4Q9H3Q1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.75■■□□□ 1.87
CDC42EP4Q9H3Q1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDC42EP4Q9H3Q1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
CDC42EP4Q9H3Q1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42EP4Q9H3Q1 WASH5P-204ENST00000632292 975 ntBASIC26.73■■□□□ 1.87
CDC42EP4Q9H3Q1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42EP4Q9H3Q1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42EP4Q9H3Q1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDC42EP4Q9H3Q1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CDC42EP4Q9H3Q1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42EP4Q9H3Q1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDC42EP4Q9H3Q1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42EP4Q9H3Q1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42EP4Q9H3Q1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42EP4Q9H3Q1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42EP4Q9H3Q1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
CDC42EP4Q9H3Q1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42EP4Q9H3Q1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CDC42EP4Q9H3Q1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42EP4Q9H3Q1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CDC42EP4Q9H3Q1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42EP4Q9H3Q1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42EP4Q9H3Q1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42EP4Q9H3Q1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42EP4Q9H3Q1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CDC42EP4Q9H3Q1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.65■■□□□ 1.86
CDC42EP4Q9H3Q1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.65■■□□□ 1.86
CDC42EP4Q9H3Q1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42EP4Q9H3Q1 AL121749.1-202ENST00000609313 2153 ntBASIC26.64■■□□□ 1.86
CDC42EP4Q9H3Q1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
CDC42EP4Q9H3Q1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CDC42EP4Q9H3Q1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42EP4Q9H3Q1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42EP4Q9H3Q1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.62■■□□□ 1.85
CDC42EP4Q9H3Q1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42EP4Q9H3Q1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42EP4Q9H3Q1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDC42EP4Q9H3Q1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.61■■□□□ 1.85
CDC42EP4Q9H3Q1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42EP4Q9H3Q1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CDC42EP4Q9H3Q1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDC42EP4Q9H3Q1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.6■■□□□ 1.85
CDC42EP4Q9H3Q1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.6■■□□□ 1.85
CDC42EP4Q9H3Q1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDC42EP4Q9H3Q1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.59■■□□□ 1.85
CDC42EP4Q9H3Q1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.59■■□□□ 1.85
CDC42EP4Q9H3Q1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42EP4Q9H3Q1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42EP4Q9H3Q1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDC42EP4Q9H3Q1 AC010864.1-201ENST00000609407 1511 ntBASIC26.58■■□□□ 1.85
CDC42EP4Q9H3Q1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDC42EP4Q9H3Q1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CDC42EP4Q9H3Q1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CDC42EP4Q9H3Q1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42EP4Q9H3Q1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDC42EP4Q9H3Q1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42EP4Q9H3Q1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42EP4Q9H3Q1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42EP4Q9H3Q1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42EP4Q9H3Q1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42EP4Q9H3Q1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42EP4Q9H3Q1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDC42EP4Q9H3Q1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.54■■□□□ 1.84
CDC42EP4Q9H3Q1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CDC42EP4Q9H3Q1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDC42EP4Q9H3Q1 AL133380.1-201ENST00000506013 324 ntBASIC26.53■■□□□ 1.84
CDC42EP4Q9H3Q1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42EP4Q9H3Q1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42EP4Q9H3Q1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.51■■□□□ 1.83
CDC42EP4Q9H3Q1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.5■■□□□ 1.83
CDC42EP4Q9H3Q1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.49■■□□□ 1.83
CDC42EP4Q9H3Q1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDC42EP4Q9H3Q1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.49■■□□□ 1.83
CDC42EP4Q9H3Q1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CDC42EP4Q9H3Q1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CDC42EP4Q9H3Q1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDC42EP4Q9H3Q1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42EP4Q9H3Q1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CDC42EP4Q9H3Q1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42EP4Q9H3Q1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42EP4Q9H3Q1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.46■■□□□ 1.83
CDC42EP4Q9H3Q1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42EP4Q9H3Q1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.45■■□□□ 1.82
CDC42EP4Q9H3Q1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.44■■□□□ 1.82
CDC42EP4Q9H3Q1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
CDC42EP4Q9H3Q1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42EP4Q9H3Q1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42EP4Q9H3Q1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42EP4Q9H3Q1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42EP4Q9H3Q1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42EP4Q9H3Q1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42EP4Q9H3Q1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42EP4Q9H3Q1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CDC42EP4Q9H3Q1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.42■■□□□ 1.82
CDC42EP4Q9H3Q1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42EP4Q9H3Q1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
CDC42EP4Q9H3Q1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms