Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LCE3DQ9BYE3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
LCE3DQ9BYE3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LCE3DQ9BYE3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LCE3DQ9BYE3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
LCE3DQ9BYE3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LCE3DQ9BYE3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
LCE3DQ9BYE3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LCE3DQ9BYE3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 AC015813.7-201ENST00000623294 581 ntBASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
LCE3DQ9BYE3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC7.03□□□□□ -1.28
LCE3DQ9BYE3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LCE3DQ9BYE3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LCE3DQ9BYE3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LCE3DQ9BYE3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
LCE3DQ9BYE3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
LCE3DQ9BYE3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LCE3DQ9BYE3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LCE3DQ9BYE3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LCE3DQ9BYE3 AL121749.1-202ENST00000609313 2153 ntBASIC7.01□□□□□ -1.29
LCE3DQ9BYE3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC7□□□□□ -1.29
LCE3DQ9BYE3 AC135731.1-201ENST00000569415 2548 ntBASIC7□□□□□ -1.29
LCE3DQ9BYE3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC7□□□□□ -1.29
LCE3DQ9BYE3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC7□□□□□ -1.29
LCE3DQ9BYE3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LCE3DQ9BYE3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC7□□□□□ -1.29
LCE3DQ9BYE3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
LCE3DQ9BYE3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
LCE3DQ9BYE3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LCE3DQ9BYE3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC7□□□□□ -1.29
LCE3DQ9BYE3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LCE3DQ9BYE3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
LCE3DQ9BYE3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
LCE3DQ9BYE3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms