Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SCRT1Q9BWW7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.07■□□□□ 0.96
SCRT1Q9BWW7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCRT1Q9BWW7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCRT1Q9BWW7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.06■□□□□ 0.96
SCRT1Q9BWW7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCRT1Q9BWW7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCRT1Q9BWW7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.05■□□□□ 0.96
SCRT1Q9BWW7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCRT1Q9BWW7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCRT1Q9BWW7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SCRT1Q9BWW7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCRT1Q9BWW7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCRT1Q9BWW7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.03■□□□□ 0.96
SCRT1Q9BWW7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCRT1Q9BWW7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
SCRT1Q9BWW7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.02■□□□□ 0.96
SCRT1Q9BWW7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCRT1Q9BWW7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21■□□□□ 0.95
SCRT1Q9BWW7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCRT1Q9BWW7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.99■□□□□ 0.95
SCRT1Q9BWW7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCRT1Q9BWW7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCRT1Q9BWW7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCRT1Q9BWW7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.98■□□□□ 0.95
SCRT1Q9BWW7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCRT1Q9BWW7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCRT1Q9BWW7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCRT1Q9BWW7 DRD5P2-201ENST00000421395 2012 ntBASIC20.98■□□□□ 0.95
SCRT1Q9BWW7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCRT1Q9BWW7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.97■□□□□ 0.95
SCRT1Q9BWW7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.97■□□□□ 0.95
SCRT1Q9BWW7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCRT1Q9BWW7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCRT1Q9BWW7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCRT1Q9BWW7 DYNLL1-208ENST00000550178 581 ntBASIC20.96■□□□□ 0.95
SCRT1Q9BWW7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCRT1Q9BWW7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCRT1Q9BWW7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCRT1Q9BWW7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SCRT1Q9BWW7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCRT1Q9BWW7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCRT1Q9BWW7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCRT1Q9BWW7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.92■□□□□ 0.94
SCRT1Q9BWW7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCRT1Q9BWW7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCRT1Q9BWW7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCRT1Q9BWW7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SCRT1Q9BWW7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCRT1Q9BWW7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SCRT1Q9BWW7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCRT1Q9BWW7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCRT1Q9BWW7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCRT1Q9BWW7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCRT1Q9BWW7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCRT1Q9BWW7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCRT1Q9BWW7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.86■□□□□ 0.93
SCRT1Q9BWW7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCRT1Q9BWW7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.86■□□□□ 0.93
SCRT1Q9BWW7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCRT1Q9BWW7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.85■□□□□ 0.93
SCRT1Q9BWW7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCRT1Q9BWW7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCRT1Q9BWW7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCRT1Q9BWW7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCRT1Q9BWW7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCRT1Q9BWW7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.83■□□□□ 0.93
SCRT1Q9BWW7 AL135925.1-201ENST00000605920 1701 ntBASIC20.83■□□□□ 0.92
SCRT1Q9BWW7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCRT1Q9BWW7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.83■□□□□ 0.92
SCRT1Q9BWW7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCRT1Q9BWW7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCRT1Q9BWW7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCRT1Q9BWW7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.82■□□□□ 0.92
SCRT1Q9BWW7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCRT1Q9BWW7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCRT1Q9BWW7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCRT1Q9BWW7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCRT1Q9BWW7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCRT1Q9BWW7 AL031258.1-201ENST00000623562 325 ntBASIC20.8■□□□□ 0.92
SCRT1Q9BWW7 AL139393.2-201ENST00000608721 2025 ntBASIC20.8■□□□□ 0.92
SCRT1Q9BWW7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCRT1Q9BWW7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCRT1Q9BWW7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCRT1Q9BWW7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCRT1Q9BWW7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCRT1Q9BWW7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SCRT1Q9BWW7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCRT1Q9BWW7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SCRT1Q9BWW7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SCRT1Q9BWW7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCRT1Q9BWW7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SCRT1Q9BWW7 AL449106.1-201ENST00000608517 1980 ntBASIC20.76■□□□□ 0.91
SCRT1Q9BWW7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.76■□□□□ 0.91
SCRT1Q9BWW7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.75■□□□□ 0.91
SCRT1Q9BWW7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCRT1Q9BWW7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCRT1Q9BWW7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.74■□□□□ 0.91
SCRT1Q9BWW7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCRT1Q9BWW7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms