Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL033527.3-201ENST00000566366 1196 ntBASIC22.91■■□□□ 1.26
CSMD1Q96PZ7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.91■■□□□ 1.26
CSMD1Q96PZ7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.9■■□□□ 1.26
CSMD1Q96PZ7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CSMD1Q96PZ7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSMD1Q96PZ7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CSMD1Q96PZ7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.88■■□□□ 1.25
CSMD1Q96PZ7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSMD1Q96PZ7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.88■■□□□ 1.25
CSMD1Q96PZ7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSMD1Q96PZ7 AC108673.1-201ENST00000510422 1159 ntBASIC22.88■■□□□ 1.25
CSMD1Q96PZ7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSMD1Q96PZ7 AL592295.1-201ENST00000400984 884 ntBASIC22.87■■□□□ 1.25
CSMD1Q96PZ7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSMD1Q96PZ7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.86■■□□□ 1.25
CSMD1Q96PZ7 AC019069.1-201ENST00000610008 1333 ntBASIC22.86■■□□□ 1.25
CSMD1Q96PZ7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSMD1Q96PZ7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSMD1Q96PZ7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
CSMD1Q96PZ7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSMD1Q96PZ7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC22.85■■□□□ 1.25
CSMD1Q96PZ7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSMD1Q96PZ7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.84■■□□□ 1.25
CSMD1Q96PZ7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.84■■□□□ 1.25
CSMD1Q96PZ7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.83■■□□□ 1.25
CSMD1Q96PZ7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.83■■□□□ 1.25
CSMD1Q96PZ7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CSMD1Q96PZ7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.82■■□□□ 1.24
CSMD1Q96PZ7 AC008813.1-201ENST00000536597 885 ntBASIC22.82■■□□□ 1.24
CSMD1Q96PZ7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CSMD1Q96PZ7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.81■■□□□ 1.24
CSMD1Q96PZ7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CSMD1Q96PZ7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSMD1Q96PZ7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.81■■□□□ 1.24
CSMD1Q96PZ7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CSMD1Q96PZ7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CSMD1Q96PZ7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.8■■□□□ 1.24
CSMD1Q96PZ7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CSMD1Q96PZ7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CSMD1Q96PZ7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.79■■□□□ 1.24
CSMD1Q96PZ7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSMD1Q96PZ7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CSMD1Q96PZ7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSMD1Q96PZ7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
CSMD1Q96PZ7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.77■■□□□ 1.24
CSMD1Q96PZ7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSMD1Q96PZ7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.76■■□□□ 1.23
CSMD1Q96PZ7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CSMD1Q96PZ7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CSMD1Q96PZ7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CSMD1Q96PZ7 RARRES2P1-201ENST00000474487 481 ntBASIC22.75■■□□□ 1.23
CSMD1Q96PZ7 AL035685.1-201ENST00000636663 812 ntBASIC22.75■■□□□ 1.23
CSMD1Q96PZ7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.74■■□□□ 1.23
CSMD1Q96PZ7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CSMD1Q96PZ7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.74■■□□□ 1.23
CSMD1Q96PZ7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.74■■□□□ 1.23
CSMD1Q96PZ7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CSMD1Q96PZ7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSMD1Q96PZ7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CSMD1Q96PZ7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CSMD1Q96PZ7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSMD1Q96PZ7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSMD1Q96PZ7 TSPY13P-201ENST00000338964 914 ntBASIC22.71■■□□□ 1.23
CSMD1Q96PZ7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CSMD1Q96PZ7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.71■■□□□ 1.23
CSMD1Q96PZ7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CSMD1Q96PZ7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.7■■□□□ 1.23
CSMD1Q96PZ7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.7■■□□□ 1.23
CSMD1Q96PZ7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CSMD1Q96PZ7 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.7■■□□□ 1.22
CSMD1Q96PZ7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CSMD1Q96PZ7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.69■■□□□ 1.22
CSMD1Q96PZ7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.69■■□□□ 1.22
CSMD1Q96PZ7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSMD1Q96PZ7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSMD1Q96PZ7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSMD1Q96PZ7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSMD1Q96PZ7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSMD1Q96PZ7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSMD1Q96PZ7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSMD1Q96PZ7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSMD1Q96PZ7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CSMD1Q96PZ7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
CSMD1Q96PZ7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CSMD1Q96PZ7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CSMD1Q96PZ7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CSMD1Q96PZ7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.63■■□□□ 1.21
CSMD1Q96PZ7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.63■■□□□ 1.21
CSMD1Q96PZ7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.62■■□□□ 1.21
CSMD1Q96PZ7 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.62■■□□□ 1.21
CSMD1Q96PZ7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CSMD1Q96PZ7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CSMD1Q96PZ7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.6■■□□□ 1.21
CSMD1Q96PZ7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CSMD1Q96PZ7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CSMD1Q96PZ7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CSMD1Q96PZ7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.57■■□□□ 1.2
CSMD1Q96PZ7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.57■■□□□ 1.2
CSMD1Q96PZ7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CSMD1Q96PZ7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms