Protein–RNA interactions for Protein: Q96CB9

NSUN4, 5-methylcytosine rRNA methyltransferase NSUN4, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN4Q96CB9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.88■■■□□ 2.69
NSUN4Q96CB9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
NSUN4Q96CB9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NSUN4Q96CB9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NSUN4Q96CB9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NSUN4Q96CB9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
NSUN4Q96CB9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NSUN4Q96CB9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.83■■■□□ 2.69
NSUN4Q96CB9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NSUN4Q96CB9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NSUN4Q96CB9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.82■■■□□ 2.68
NSUN4Q96CB9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.68
NSUN4Q96CB9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.82■■■□□ 2.68
NSUN4Q96CB9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NSUN4Q96CB9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NSUN4Q96CB9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NSUN4Q96CB9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
NSUN4Q96CB9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.8■■■□□ 2.68
NSUN4Q96CB9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NSUN4Q96CB9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
NSUN4Q96CB9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
NSUN4Q96CB9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NSUN4Q96CB9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
NSUN4Q96CB9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
NSUN4Q96CB9 AC010864.1-201ENST00000609407 1511 ntBASIC31.75■■■□□ 2.67
NSUN4Q96CB9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.75■■■□□ 2.67
NSUN4Q96CB9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
NSUN4Q96CB9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.75■■■□□ 2.67
NSUN4Q96CB9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.74■■■□□ 2.67
NSUN4Q96CB9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NSUN4Q96CB9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.72■■■□□ 2.67
NSUN4Q96CB9 HLA-V-202ENST00000446817 847 ntBASIC31.72■■■□□ 2.67
NSUN4Q96CB9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.72■■■□□ 2.67
NSUN4Q96CB9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.7■■■□□ 2.67
NSUN4Q96CB9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
NSUN4Q96CB9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NSUN4Q96CB9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.69■■■□□ 2.66
NSUN4Q96CB9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NSUN4Q96CB9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NSUN4Q96CB9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.69■■■□□ 2.66
NSUN4Q96CB9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
NSUN4Q96CB9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.68■■■□□ 2.66
NSUN4Q96CB9 LINC01971-201ENST00000617888 1048 ntBASIC31.68■■■□□ 2.66
NSUN4Q96CB9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NSUN4Q96CB9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
NSUN4Q96CB9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NSUN4Q96CB9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.65■■■□□ 2.66
NSUN4Q96CB9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.64■■■□□ 2.66
NSUN4Q96CB9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
NSUN4Q96CB9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.63■■■□□ 2.65
NSUN4Q96CB9 DUX4L11-201ENST00000611504 1267 ntBASIC31.63■■■□□ 2.65
NSUN4Q96CB9 DUX4L12-201ENST00000614593 1267 ntBASIC31.63■■■□□ 2.65
NSUN4Q96CB9 DUX4L14-201ENST00000621227 1267 ntBASIC31.63■■■□□ 2.65
NSUN4Q96CB9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NSUN4Q96CB9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.62■■■□□ 2.65
NSUN4Q96CB9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.62■■■□□ 2.65
NSUN4Q96CB9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NSUN4Q96CB9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
NSUN4Q96CB9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NSUN4Q96CB9 MIR3648-2-201ENST00000581792 180 ntBASIC31.58■■■□□ 2.65
NSUN4Q96CB9 MIR3648-1-201ENST00000615959 180 ntBASIC31.58■■■□□ 2.65
NSUN4Q96CB9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NSUN4Q96CB9 AL135925.1-201ENST00000605920 1701 ntBASIC31.58■■■□□ 2.65
NSUN4Q96CB9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
NSUN4Q96CB9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.57■■■□□ 2.64
NSUN4Q96CB9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.56■■■□□ 2.64
NSUN4Q96CB9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.56■■■□□ 2.64
NSUN4Q96CB9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
NSUN4Q96CB9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NSUN4Q96CB9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.55■■■□□ 2.64
NSUN4Q96CB9 CR559946.2-201ENST00000623684 991 ntBASIC31.54■■■□□ 2.64
NSUN4Q96CB9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.53■■■□□ 2.64
NSUN4Q96CB9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.52■■■□□ 2.64
NSUN4Q96CB9 AC016575.1-201ENST00000607026 382 ntBASIC31.52■■■□□ 2.64
NSUN4Q96CB9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
NSUN4Q96CB9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
NSUN4Q96CB9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
NSUN4Q96CB9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.51■■■□□ 2.63
NSUN4Q96CB9 MIR639-201ENST00000384974 98 ntBASIC31.5■■■□□ 2.63
NSUN4Q96CB9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.5■■■□□ 2.63
NSUN4Q96CB9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.5■■■□□ 2.63
NSUN4Q96CB9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NSUN4Q96CB9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
NSUN4Q96CB9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NSUN4Q96CB9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.48■■■□□ 2.63
NSUN4Q96CB9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.48■■■□□ 2.63
NSUN4Q96CB9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
NSUN4Q96CB9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
NSUN4Q96CB9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NSUN4Q96CB9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
NSUN4Q96CB9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
NSUN4Q96CB9 LINC00273-201ENST00000539813 1452 ntBASIC31.46■■■□□ 2.63
NSUN4Q96CB9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NSUN4Q96CB9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.46■■■□□ 2.63
NSUN4Q96CB9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NSUN4Q96CB9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
NSUN4Q96CB9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
NSUN4Q96CB9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.45■■■□□ 2.62
NSUN4Q96CB9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NSUN4Q96CB9 DUX4L13-201ENST00000554103 1267 ntBASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms