Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SMARCD2Q92925 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.49■■□□□ 1.99
SMARCD2Q92925 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.49■■□□□ 1.99
SMARCD2Q92925 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SMARCD2Q92925 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMARCD2Q92925 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMARCD2Q92925 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMARCD2Q92925 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.48■■□□□ 1.99
SMARCD2Q92925 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMARCD2Q92925 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
SMARCD2Q92925 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.47■■□□□ 1.99
SMARCD2Q92925 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCD2Q92925 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCD2Q92925 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCD2Q92925 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
SMARCD2Q92925 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCD2Q92925 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.45■■□□□ 1.98
SMARCD2Q92925 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCD2Q92925 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
SMARCD2Q92925 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCD2Q92925 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCD2Q92925 DUX4L13-201ENST00000554103 1267 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 DUX4L15-201ENST00000611059 1267 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 DUX4L23-201ENST00000615195 1269 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 DUX4L24-201ENST00000617576 1269 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 DUX4L22-201ENST00000618238 1269 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 DUX4L20-201ENST00000619712 1269 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 DUX4L21-201ENST00000622058 1269 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 DUX4L10-201ENST00000622460 1267 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 DUX4L25-201ENST00000624915 1269 ntBASIC27.43■■□□□ 1.98
SMARCD2Q92925 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMARCD2Q92925 HSD17B1P1-201ENST00000590052 955 ntBASIC27.42■■□□□ 1.98
SMARCD2Q92925 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCD2Q92925 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCD2Q92925 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
SMARCD2Q92925 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SMARCD2Q92925 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SMARCD2Q92925 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMARCD2Q92925 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SMARCD2Q92925 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.38■■□□□ 1.97
SMARCD2Q92925 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.37■■□□□ 1.97
SMARCD2Q92925 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCD2Q92925 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCD2Q92925 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCD2Q92925 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.35■■□□□ 1.97
SMARCD2Q92925 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCD2Q92925 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.34■■□□□ 1.97
SMARCD2Q92925 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.34■■□□□ 1.97
SMARCD2Q92925 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.33■■□□□ 1.97
SMARCD2Q92925 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.33■■□□□ 1.97
SMARCD2Q92925 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.33■■□□□ 1.97
SMARCD2Q92925 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
SMARCD2Q92925 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCD2Q92925 AL161658.1-201ENST00000623641 1967 ntBASIC27.31■■□□□ 1.96
SMARCD2Q92925 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.31■■□□□ 1.96
SMARCD2Q92925 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCD2Q92925 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCD2Q92925 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCD2Q92925 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCD2Q92925 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCD2Q92925 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCD2Q92925 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.29■■□□□ 1.96
SMARCD2Q92925 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SMARCD2Q92925 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.28■■□□□ 1.96
SMARCD2Q92925 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
SMARCD2Q92925 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.28■■□□□ 1.96
SMARCD2Q92925 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
SMARCD2Q92925 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCD2Q92925 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
SMARCD2Q92925 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCD2Q92925 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SMARCD2Q92925 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SMARCD2Q92925 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
SMARCD2Q92925 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCD2Q92925 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCD2Q92925 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCD2Q92925 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.23■■□□□ 1.95
SMARCD2Q92925 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.23■■□□□ 1.95
SMARCD2Q92925 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.23■■□□□ 1.95
SMARCD2Q92925 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCD2Q92925 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.21■■□□□ 1.95
SMARCD2Q92925 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.2■■□□□ 1.95
SMARCD2Q92925 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.2■■□□□ 1.94
SMARCD2Q92925 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCD2Q92925 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCD2Q92925 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.19■■□□□ 1.94
SMARCD2Q92925 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.19■■□□□ 1.94
SMARCD2Q92925 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCD2Q92925 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCD2Q92925 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCD2Q92925 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.18■■□□□ 1.94
SMARCD2Q92925 LINC00273-201ENST00000539813 1452 ntBASIC27.18■■□□□ 1.94
SMARCD2Q92925 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.18■■□□□ 1.94
SMARCD2Q92925 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SMARCD2Q92925 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCD2Q92925 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.16■■□□□ 1.94
SMARCD2Q92925 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.16■■□□□ 1.94
SMARCD2Q92925 AC010864.1-201ENST00000609407 1511 ntBASIC27.16■■□□□ 1.94
SMARCD2Q92925 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCD2Q92925 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms