Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.88■■■□□ 2.21
GBF1Q92538 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
GBF1Q92538 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
GBF1Q92538 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
GBF1Q92538 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
GBF1Q92538 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
GBF1Q92538 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
GBF1Q92538 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.2
GBF1Q92538 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
GBF1Q92538 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
GBF1Q92538 GPX1-201ENST00000419349 1106 ntBASIC28.81■■■□□ 2.2
GBF1Q92538 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
GBF1Q92538 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.8■■■□□ 2.2
GBF1Q92538 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.8■■■□□ 2.2
GBF1Q92538 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
GBF1Q92538 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.79■■■□□ 2.2
GBF1Q92538 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
GBF1Q92538 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
GBF1Q92538 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.77■■■□□ 2.2
GBF1Q92538 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
GBF1Q92538 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
GBF1Q92538 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
GBF1Q92538 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
GBF1Q92538 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.76■■■□□ 2.2
GBF1Q92538 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
GBF1Q92538 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
GBF1Q92538 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.76■■■□□ 2.19
GBF1Q92538 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.76■■■□□ 2.19
GBF1Q92538 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.76■■■□□ 2.19
GBF1Q92538 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
GBF1Q92538 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.74■■■□□ 2.19
GBF1Q92538 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.71■■■□□ 2.19
GBF1Q92538 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
GBF1Q92538 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
GBF1Q92538 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.69■■■□□ 2.18
GBF1Q92538 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
GBF1Q92538 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
GBF1Q92538 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
GBF1Q92538 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.67■■■□□ 2.18
GBF1Q92538 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.66■■■□□ 2.18
GBF1Q92538 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.66■■■□□ 2.18
GBF1Q92538 AC012354.3-201ENST00000623734 483 ntBASIC28.66■■■□□ 2.18
GBF1Q92538 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
GBF1Q92538 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
GBF1Q92538 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.65■■■□□ 2.18
GBF1Q92538 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
GBF1Q92538 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
GBF1Q92538 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
GBF1Q92538 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.63■■■□□ 2.17
GBF1Q92538 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.63■■■□□ 2.17
GBF1Q92538 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
GBF1Q92538 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
GBF1Q92538 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
GBF1Q92538 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
GBF1Q92538 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
GBF1Q92538 NTF6A-201ENST00000591175 560 ntBASIC28.6■■■□□ 2.17
GBF1Q92538 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.6■■■□□ 2.17
GBF1Q92538 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
GBF1Q92538 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.6■■■□□ 2.17
GBF1Q92538 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
GBF1Q92538 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
GBF1Q92538 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
GBF1Q92538 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
GBF1Q92538 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.58■■■□□ 2.17
GBF1Q92538 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
GBF1Q92538 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
GBF1Q92538 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
GBF1Q92538 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
GBF1Q92538 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
GBF1Q92538 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
GBF1Q92538 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.53■■■□□ 2.16
GBF1Q92538 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.53■■■□□ 2.16
GBF1Q92538 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
GBF1Q92538 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
GBF1Q92538 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
GBF1Q92538 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
GBF1Q92538 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
GBF1Q92538 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
GBF1Q92538 RNF126P1-201ENST00000567452 1320 ntBASIC28.5■■■□□ 2.15
GBF1Q92538 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.49■■■□□ 2.15
GBF1Q92538 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
GBF1Q92538 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.48■■■□□ 2.15
GBF1Q92538 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
GBF1Q92538 LINC00273-201ENST00000539813 1452 ntBASIC28.47■■■□□ 2.15
GBF1Q92538 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.47■■■□□ 2.15
GBF1Q92538 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
GBF1Q92538 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.47■■■□□ 2.15
GBF1Q92538 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
GBF1Q92538 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
GBF1Q92538 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms