Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CNEP1R1Q8N9A8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CNEP1R1Q8N9A8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CNEP1R1Q8N9A8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CNEP1R1Q8N9A8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CNEP1R1Q8N9A8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CNEP1R1Q8N9A8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.4■■□□□ 1.34
CNEP1R1Q8N9A8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CNEP1R1Q8N9A8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CNEP1R1Q8N9A8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.4■■□□□ 1.34
CNEP1R1Q8N9A8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CNEP1R1Q8N9A8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CNEP1R1Q8N9A8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CNEP1R1Q8N9A8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CNEP1R1Q8N9A8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CNEP1R1Q8N9A8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CNEP1R1Q8N9A8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CNEP1R1Q8N9A8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CNEP1R1Q8N9A8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.36■■□□□ 1.33
CNEP1R1Q8N9A8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CNEP1R1Q8N9A8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.36■■□□□ 1.33
CNEP1R1Q8N9A8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.36■■□□□ 1.33
CNEP1R1Q8N9A8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CNEP1R1Q8N9A8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
CNEP1R1Q8N9A8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNEP1R1Q8N9A8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNEP1R1Q8N9A8 HLA-V-202ENST00000446817 847 ntBASIC23.33■■□□□ 1.33
CNEP1R1Q8N9A8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNEP1R1Q8N9A8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CNEP1R1Q8N9A8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CNEP1R1Q8N9A8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CNEP1R1Q8N9A8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNEP1R1Q8N9A8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNEP1R1Q8N9A8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.29■■□□□ 1.32
CNEP1R1Q8N9A8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNEP1R1Q8N9A8 AC010864.1-201ENST00000609407 1511 ntBASIC23.28■■□□□ 1.32
CNEP1R1Q8N9A8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
CNEP1R1Q8N9A8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.28■■□□□ 1.32
CNEP1R1Q8N9A8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.28■■□□□ 1.32
CNEP1R1Q8N9A8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNEP1R1Q8N9A8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNEP1R1Q8N9A8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNEP1R1Q8N9A8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNEP1R1Q8N9A8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CNEP1R1Q8N9A8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CNEP1R1Q8N9A8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.27■■□□□ 1.32
CNEP1R1Q8N9A8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNEP1R1Q8N9A8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.26■■□□□ 1.31
CNEP1R1Q8N9A8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CNEP1R1Q8N9A8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNEP1R1Q8N9A8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.25■■□□□ 1.31
CNEP1R1Q8N9A8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
CNEP1R1Q8N9A8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CNEP1R1Q8N9A8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CNEP1R1Q8N9A8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CNEP1R1Q8N9A8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CNEP1R1Q8N9A8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CNEP1R1Q8N9A8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.22■■□□□ 1.31
CNEP1R1Q8N9A8 LINC01971-201ENST00000617888 1048 ntBASIC23.22■■□□□ 1.31
CNEP1R1Q8N9A8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.2■■□□□ 1.3
CNEP1R1Q8N9A8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
CNEP1R1Q8N9A8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNEP1R1Q8N9A8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNEP1R1Q8N9A8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.19■■□□□ 1.3
CNEP1R1Q8N9A8 DUX4L11-201ENST00000611504 1267 ntBASIC23.19■■□□□ 1.3
CNEP1R1Q8N9A8 DUX4L12-201ENST00000614593 1267 ntBASIC23.19■■□□□ 1.3
CNEP1R1Q8N9A8 DUX4L14-201ENST00000621227 1267 ntBASIC23.19■■□□□ 1.3
CNEP1R1Q8N9A8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.19■■□□□ 1.3
CNEP1R1Q8N9A8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNEP1R1Q8N9A8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.18■■□□□ 1.3
CNEP1R1Q8N9A8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CNEP1R1Q8N9A8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
CNEP1R1Q8N9A8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.17■■□□□ 1.3
CNEP1R1Q8N9A8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.17■■□□□ 1.3
CNEP1R1Q8N9A8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CNEP1R1Q8N9A8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.15■■□□□ 1.3
CNEP1R1Q8N9A8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.15■■□□□ 1.3
CNEP1R1Q8N9A8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
CNEP1R1Q8N9A8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.14■■□□□ 1.29
CNEP1R1Q8N9A8 AL135925.1-201ENST00000605920 1701 ntBASIC23.13■■□□□ 1.29
CNEP1R1Q8N9A8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.13■■□□□ 1.29
CNEP1R1Q8N9A8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 MIR3648-2-201ENST00000581792 180 ntBASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 MIR3648-1-201ENST00000615959 180 ntBASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNEP1R1Q8N9A8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNEP1R1Q8N9A8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNEP1R1Q8N9A8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.11■■□□□ 1.29
CNEP1R1Q8N9A8 AC016575.1-201ENST00000607026 382 ntBASIC23.11■■□□□ 1.29
CNEP1R1Q8N9A8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNEP1R1Q8N9A8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.1■■□□□ 1.29
CNEP1R1Q8N9A8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.1■■□□□ 1.29
CNEP1R1Q8N9A8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNEP1R1Q8N9A8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNEP1R1Q8N9A8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms