Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC37.73■■■■□ 3.63
XRN1Q8IZH2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC37.72■■■■□ 3.63
XRN1Q8IZH2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
XRN1Q8IZH2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC37.7■■■■□ 3.63
XRN1Q8IZH2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC37.7■■■■□ 3.63
XRN1Q8IZH2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC37.69■■■■□ 3.62
XRN1Q8IZH2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC37.67■■■■□ 3.62
XRN1Q8IZH2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
XRN1Q8IZH2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC37.67■■■■□ 3.62
XRN1Q8IZH2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
XRN1Q8IZH2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC37.61■■■■□ 3.61
XRN1Q8IZH2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC37.61■■■■□ 3.61
XRN1Q8IZH2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC37.57■■■■□ 3.6
XRN1Q8IZH2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC37.57■■■■□ 3.6
XRN1Q8IZH2 RARRES2P2-201ENST00000394842 485 ntBASIC37.56■■■■□ 3.6
XRN1Q8IZH2 HES6-205ENST00000409356 528 ntTSL 2 BASIC37.56■■■■□ 3.6
XRN1Q8IZH2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC37.55■■■■□ 3.6
XRN1Q8IZH2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
XRN1Q8IZH2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
XRN1Q8IZH2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
XRN1Q8IZH2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC37.54■■■■□ 3.6
XRN1Q8IZH2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
XRN1Q8IZH2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC37.53■■■■□ 3.6
XRN1Q8IZH2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC37.53■■■■□ 3.6
XRN1Q8IZH2 CHML-204ENST00000638121 920 ntTSL 2 BASIC37.53■■■■□ 3.6
XRN1Q8IZH2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC37.52■■■■□ 3.6
XRN1Q8IZH2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC37.52■■■■□ 3.6
XRN1Q8IZH2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC37.5■■■■□ 3.59
XRN1Q8IZH2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC37.5■■■■□ 3.59
XRN1Q8IZH2 ABHD17AP5-201ENST00000580133 923 ntBASIC37.49■■■■□ 3.59
XRN1Q8IZH2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
XRN1Q8IZH2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC37.48■■■■□ 3.59
XRN1Q8IZH2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC37.47■■■■□ 3.59
XRN1Q8IZH2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC37.47■■■■□ 3.59
XRN1Q8IZH2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
XRN1Q8IZH2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
XRN1Q8IZH2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
XRN1Q8IZH2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
XRN1Q8IZH2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
XRN1Q8IZH2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
XRN1Q8IZH2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
XRN1Q8IZH2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC37.46■■■■□ 3.59
XRN1Q8IZH2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC37.46■■■■□ 3.59
XRN1Q8IZH2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC37.46■■■■□ 3.59
XRN1Q8IZH2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
XRN1Q8IZH2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
XRN1Q8IZH2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
XRN1Q8IZH2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC37.4■■■■□ 3.58
XRN1Q8IZH2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
XRN1Q8IZH2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC37.39■■■■□ 3.58
XRN1Q8IZH2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC37.38■■■■□ 3.57
XRN1Q8IZH2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
XRN1Q8IZH2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC37.37■■■■□ 3.57
XRN1Q8IZH2 AC120057.4-201ENST00000624722 1615 ntBASIC37.35■■■■□ 3.57
XRN1Q8IZH2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
XRN1Q8IZH2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
XRN1Q8IZH2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
XRN1Q8IZH2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
XRN1Q8IZH2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC37.33■■■■□ 3.57
XRN1Q8IZH2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC37.33■■■■□ 3.57
XRN1Q8IZH2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC37.32■■■■□ 3.56
XRN1Q8IZH2 GPX1-201ENST00000419349 1106 ntBASIC37.32■■■■□ 3.56
XRN1Q8IZH2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
XRN1Q8IZH2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
XRN1Q8IZH2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC37.31■■■■□ 3.56
XRN1Q8IZH2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
XRN1Q8IZH2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC37.3■■■■□ 3.56
XRN1Q8IZH2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
XRN1Q8IZH2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC37.29■■■■□ 3.56
XRN1Q8IZH2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC37.28■■■■□ 3.56
XRN1Q8IZH2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC37.27■■■■□ 3.56
XRN1Q8IZH2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC37.27■■■■□ 3.56
XRN1Q8IZH2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC37.27■■■■□ 3.56
XRN1Q8IZH2 LINC00273-201ENST00000539813 1452 ntBASIC37.27■■■■□ 3.56
XRN1Q8IZH2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
XRN1Q8IZH2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
XRN1Q8IZH2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC37.25■■■■□ 3.55
XRN1Q8IZH2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
XRN1Q8IZH2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
XRN1Q8IZH2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
XRN1Q8IZH2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC37.24■■■■□ 3.55
XRN1Q8IZH2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
XRN1Q8IZH2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
XRN1Q8IZH2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC37.22■■■■□ 3.55
XRN1Q8IZH2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
XRN1Q8IZH2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC37.21■■■■□ 3.55
XRN1Q8IZH2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC37.21■■■■□ 3.55
XRN1Q8IZH2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC37.2■■■■□ 3.55
XRN1Q8IZH2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC37.17■■■■□ 3.54
XRN1Q8IZH2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC37.16■■■■□ 3.54
XRN1Q8IZH2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
XRN1Q8IZH2 RNF126P1-201ENST00000567452 1320 ntBASIC37.16■■■■□ 3.54
XRN1Q8IZH2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC37.15■■■■□ 3.54
XRN1Q8IZH2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC37.15■■■■□ 3.54
XRN1Q8IZH2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC37.13■■■■□ 3.54
XRN1Q8IZH2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC37.13■■■■□ 3.53
XRN1Q8IZH2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
XRN1Q8IZH2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC37.13■■■■□ 3.53
XRN1Q8IZH2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC37.13■■■■□ 3.53
XRN1Q8IZH2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC37.12■■■■□ 3.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms