Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RNF135Q8IUD6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RNF135Q8IUD6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RNF135Q8IUD6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.93■■■□□ 2.06
RNF135Q8IUD6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
RNF135Q8IUD6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RNF135Q8IUD6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RNF135Q8IUD6 ABHD17AP5-201ENST00000580133 923 ntBASIC27.92■■■□□ 2.06
RNF135Q8IUD6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RNF135Q8IUD6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RNF135Q8IUD6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
RNF135Q8IUD6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.88■■■□□ 2.05
RNF135Q8IUD6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.88■■■□□ 2.05
RNF135Q8IUD6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.88■■■□□ 2.05
RNF135Q8IUD6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
RNF135Q8IUD6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.87■■■□□ 2.05
RNF135Q8IUD6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.86■■■□□ 2.05
RNF135Q8IUD6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.86■■■□□ 2.05
RNF135Q8IUD6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNF135Q8IUD6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNF135Q8IUD6 DUX4L13-201ENST00000554103 1267 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.85■■■□□ 2.05
RNF135Q8IUD6 DUX4L15-201ENST00000611059 1267 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 DUX4L23-201ENST00000615195 1269 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 DUX4L24-201ENST00000617576 1269 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 DUX4L22-201ENST00000618238 1269 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 DUX4L20-201ENST00000619712 1269 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 DUX4L21-201ENST00000622058 1269 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 DUX4L10-201ENST00000622460 1267 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 DUX4L25-201ENST00000624915 1269 ntBASIC27.85■■■□□ 2.05
RNF135Q8IUD6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RNF135Q8IUD6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
RNF135Q8IUD6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RNF135Q8IUD6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RNF135Q8IUD6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.82■■■□□ 2.04
RNF135Q8IUD6 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.82■■■□□ 2.04
RNF135Q8IUD6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.82■■■□□ 2.04
RNF135Q8IUD6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RNF135Q8IUD6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
RNF135Q8IUD6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RNF135Q8IUD6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
RNF135Q8IUD6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RNF135Q8IUD6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
RNF135Q8IUD6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
RNF135Q8IUD6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.8■■■□□ 2.04
RNF135Q8IUD6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RNF135Q8IUD6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.79■■■□□ 2.04
RNF135Q8IUD6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
RNF135Q8IUD6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RNF135Q8IUD6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RNF135Q8IUD6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RNF135Q8IUD6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RNF135Q8IUD6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.77■■■□□ 2.04
RNF135Q8IUD6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.04
RNF135Q8IUD6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RNF135Q8IUD6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.75■■■□□ 2.03
RNF135Q8IUD6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
RNF135Q8IUD6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RNF135Q8IUD6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RNF135Q8IUD6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.73■■■□□ 2.03
RNF135Q8IUD6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RNF135Q8IUD6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RNF135Q8IUD6 AC120057.4-201ENST00000624722 1615 ntBASIC27.72■■■□□ 2.03
RNF135Q8IUD6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.72■■■□□ 2.03
RNF135Q8IUD6 GPX1-201ENST00000419349 1106 ntBASIC27.72■■■□□ 2.03
RNF135Q8IUD6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.72■■■□□ 2.03
RNF135Q8IUD6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RNF135Q8IUD6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.71■■■□□ 2.03
RNF135Q8IUD6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.7■■■□□ 2.03
RNF135Q8IUD6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.7■■■□□ 2.03
RNF135Q8IUD6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.7■■■□□ 2.02
RNF135Q8IUD6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RNF135Q8IUD6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RNF135Q8IUD6 RNF126P1-201ENST00000567452 1320 ntBASIC27.68■■■□□ 2.02
RNF135Q8IUD6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
RNF135Q8IUD6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RNF135Q8IUD6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RNF135Q8IUD6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RNF135Q8IUD6 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.67■■■□□ 2.02
RNF135Q8IUD6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.66■■■□□ 2.02
RNF135Q8IUD6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
RNF135Q8IUD6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RNF135Q8IUD6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RNF135Q8IUD6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RNF135Q8IUD6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RNF135Q8IUD6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RNF135Q8IUD6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.64■■■□□ 2.02
RNF135Q8IUD6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RNF135Q8IUD6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RNF135Q8IUD6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RNF135Q8IUD6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms