Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AL139393.2-201ENST00000608721 2025 ntBASIC26.95■■□□□ 1.91
CCDC25Q86WR0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
CCDC25Q86WR0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCDC25Q86WR0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCDC25Q86WR0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
CCDC25Q86WR0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC25Q86WR0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC25Q86WR0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.93■■□□□ 1.9
CCDC25Q86WR0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
CCDC25Q86WR0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC25Q86WR0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC25Q86WR0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC25Q86WR0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC25Q86WR0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC25Q86WR0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC25Q86WR0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC25Q86WR0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC25Q86WR0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC25Q86WR0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC25Q86WR0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC25Q86WR0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC25Q86WR0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.88■■□□□ 1.89
CCDC25Q86WR0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC25Q86WR0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC25Q86WR0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC25Q86WR0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC25Q86WR0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.87■■□□□ 1.89
CCDC25Q86WR0 DRD5P2-201ENST00000421395 2012 ntBASIC26.85■■□□□ 1.89
CCDC25Q86WR0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC25Q86WR0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC25Q86WR0 WASH5P-204ENST00000632292 975 ntBASIC26.85■■□□□ 1.89
CCDC25Q86WR0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
CCDC25Q86WR0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC25Q86WR0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC25Q86WR0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC25Q86WR0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.82■■□□□ 1.88
CCDC25Q86WR0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.82■■□□□ 1.88
CCDC25Q86WR0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC25Q86WR0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC25Q86WR0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC25Q86WR0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC25Q86WR0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
CCDC25Q86WR0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC25Q86WR0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.76■■□□□ 1.87
CCDC25Q86WR0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC25Q86WR0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC25Q86WR0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC25Q86WR0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC25Q86WR0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.73■■□□□ 1.87
CCDC25Q86WR0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
CCDC25Q86WR0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC25Q86WR0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.71■■□□□ 1.87
CCDC25Q86WR0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC25Q86WR0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CCDC25Q86WR0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
CCDC25Q86WR0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC25Q86WR0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC25Q86WR0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC25Q86WR0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC25Q86WR0 AL133380.1-201ENST00000506013 324 ntBASIC26.68■■□□□ 1.86
CCDC25Q86WR0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.68■■□□□ 1.86
CCDC25Q86WR0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC25Q86WR0 AC010864.1-201ENST00000609407 1511 ntBASIC26.68■■□□□ 1.86
CCDC25Q86WR0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC25Q86WR0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
CCDC25Q86WR0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.67■■□□□ 1.86
CCDC25Q86WR0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CCDC25Q86WR0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CCDC25Q86WR0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC25Q86WR0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC25Q86WR0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC25Q86WR0 AL121749.1-202ENST00000609313 2153 ntBASIC26.64■■□□□ 1.85
CCDC25Q86WR0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC25Q86WR0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC25Q86WR0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC25Q86WR0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CCDC25Q86WR0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC25Q86WR0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC25Q86WR0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC25Q86WR0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC25Q86WR0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.61■■□□□ 1.85
CCDC25Q86WR0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC25Q86WR0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC25Q86WR0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC25Q86WR0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC25Q86WR0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC25Q86WR0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC25Q86WR0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.58■■□□□ 1.85
CCDC25Q86WR0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC25Q86WR0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC25Q86WR0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms