Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 AL139393.2-201ENST00000608721 2025 ntBASIC26.17■■□□□ 1.78
ZC3HC1Q86WB0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZC3HC1Q86WB0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZC3HC1Q86WB0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZC3HC1Q86WB0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZC3HC1Q86WB0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.16■■□□□ 1.78
ZC3HC1Q86WB0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
ZC3HC1Q86WB0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ZC3HC1Q86WB0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
ZC3HC1Q86WB0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.14■■□□□ 1.78
ZC3HC1Q86WB0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ZC3HC1Q86WB0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3HC1Q86WB0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3HC1Q86WB0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3HC1Q86WB0 AL391121.1-201ENST00000607967 1349 ntBASIC26.13■■□□□ 1.77
ZC3HC1Q86WB0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZC3HC1Q86WB0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
ZC3HC1Q86WB0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZC3HC1Q86WB0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZC3HC1Q86WB0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZC3HC1Q86WB0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ZC3HC1Q86WB0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3HC1Q86WB0 AC136428.2-201ENST00000563187 214 ntBASIC26.1■■□□□ 1.77
ZC3HC1Q86WB0 CAHM-201ENST00000604200 896 ntBASIC26.1■■□□□ 1.77
ZC3HC1Q86WB0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ZC3HC1Q86WB0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.09■■□□□ 1.77
ZC3HC1Q86WB0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3HC1Q86WB0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3HC1Q86WB0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.08■■□□□ 1.77
ZC3HC1Q86WB0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
ZC3HC1Q86WB0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ZC3HC1Q86WB0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.07■■□□□ 1.76
ZC3HC1Q86WB0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3HC1Q86WB0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3HC1Q86WB0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3HC1Q86WB0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3HC1Q86WB0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3HC1Q86WB0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.05■■□□□ 1.76
ZC3HC1Q86WB0 AC097358.2-201ENST00000607541 1159 ntBASIC26.04■■□□□ 1.76
ZC3HC1Q86WB0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.04■■□□□ 1.76
ZC3HC1Q86WB0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
ZC3HC1Q86WB0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ZC3HC1Q86WB0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
ZC3HC1Q86WB0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.03■■□□□ 1.76
ZC3HC1Q86WB0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
ZC3HC1Q86WB0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZC3HC1Q86WB0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZC3HC1Q86WB0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZC3HC1Q86WB0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.01■■□□□ 1.75
ZC3HC1Q86WB0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.01■■□□□ 1.75
ZC3HC1Q86WB0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZC3HC1Q86WB0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
ZC3HC1Q86WB0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ZC3HC1Q86WB0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.99■■□□□ 1.75
ZC3HC1Q86WB0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZC3HC1Q86WB0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ZC3HC1Q86WB0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.98■■□□□ 1.75
ZC3HC1Q86WB0 AC142086.6-201ENST00000621154 1765 ntBASIC25.98■■□□□ 1.75
ZC3HC1Q86WB0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
ZC3HC1Q86WB0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
ZC3HC1Q86WB0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZC3HC1Q86WB0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZC3HC1Q86WB0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.96■■□□□ 1.75
ZC3HC1Q86WB0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ZC3HC1Q86WB0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
ZC3HC1Q86WB0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ZC3HC1Q86WB0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZC3HC1Q86WB0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
ZC3HC1Q86WB0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZC3HC1Q86WB0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZC3HC1Q86WB0 DRD5P2-201ENST00000421395 2012 ntBASIC25.93■■□□□ 1.74
ZC3HC1Q86WB0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.93■■□□□ 1.74
ZC3HC1Q86WB0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
ZC3HC1Q86WB0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3HC1Q86WB0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3HC1Q86WB0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
ZC3HC1Q86WB0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.91■■□□□ 1.74
ZC3HC1Q86WB0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3HC1Q86WB0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
ZC3HC1Q86WB0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.9■■□□□ 1.74
ZC3HC1Q86WB0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
ZC3HC1Q86WB0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ZC3HC1Q86WB0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
ZC3HC1Q86WB0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
ZC3HC1Q86WB0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ZC3HC1Q86WB0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.89■■□□□ 1.74
ZC3HC1Q86WB0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.89■■□□□ 1.73
ZC3HC1Q86WB0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3HC1Q86WB0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3HC1Q86WB0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3HC1Q86WB0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.88■■□□□ 1.73
ZC3HC1Q86WB0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3HC1Q86WB0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3HC1Q86WB0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
ZC3HC1Q86WB0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.85■■□□□ 1.73
ZC3HC1Q86WB0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
ZC3HC1Q86WB0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZC3HC1Q86WB0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
ZC3HC1Q86WB0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZC3HC1Q86WB0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms