Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 DUX4L25-201ENST00000624915 1269 ntBASIC27.78■■■□□ 2.04
DENND4AQ7Z401 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
DENND4AQ7Z401 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
DENND4AQ7Z401 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.75■■■□□ 2.03
DENND4AQ7Z401 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
DENND4AQ7Z401 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
DENND4AQ7Z401 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.74■■■□□ 2.03
DENND4AQ7Z401 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.74■■■□□ 2.03
DENND4AQ7Z401 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.74■■■□□ 2.03
DENND4AQ7Z401 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
DENND4AQ7Z401 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
DENND4AQ7Z401 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.72■■■□□ 2.03
DENND4AQ7Z401 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.7■■■□□ 2.03
DENND4AQ7Z401 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.7■■■□□ 2.02
DENND4AQ7Z401 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
DENND4AQ7Z401 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.69■■■□□ 2.02
DENND4AQ7Z401 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.69■■■□□ 2.02
DENND4AQ7Z401 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.69■■■□□ 2.02
DENND4AQ7Z401 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
DENND4AQ7Z401 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
DENND4AQ7Z401 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.68■■■□□ 2.02
DENND4AQ7Z401 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
DENND4AQ7Z401 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.68■■■□□ 2.02
DENND4AQ7Z401 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.67■■■□□ 2.02
DENND4AQ7Z401 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.66■■■□□ 2.02
DENND4AQ7Z401 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.65■■■□□ 2.02
DENND4AQ7Z401 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
DENND4AQ7Z401 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
DENND4AQ7Z401 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
DENND4AQ7Z401 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
DENND4AQ7Z401 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
DENND4AQ7Z401 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.62■■■□□ 2.01
DENND4AQ7Z401 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.61■■■□□ 2.01
DENND4AQ7Z401 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.6■■■□□ 2.01
DENND4AQ7Z401 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
DENND4AQ7Z401 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
DENND4AQ7Z401 RARRES2P2-201ENST00000394842 485 ntBASIC27.58■■■□□ 2.01
DENND4AQ7Z401 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
DENND4AQ7Z401 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
DENND4AQ7Z401 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
DENND4AQ7Z401 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.57■■■□□ 2
DENND4AQ7Z401 AC120057.4-201ENST00000624722 1615 ntBASIC27.57■■■□□ 2
DENND4AQ7Z401 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
DENND4AQ7Z401 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.56■■■□□ 2
DENND4AQ7Z401 ABHD17AP5-201ENST00000580133 923 ntBASIC27.56■■■□□ 2
DENND4AQ7Z401 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
DENND4AQ7Z401 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
DENND4AQ7Z401 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.55■■■□□ 2
DENND4AQ7Z401 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.54■■■□□ 2
DENND4AQ7Z401 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.53■■■□□ 2
DENND4AQ7Z401 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
DENND4AQ7Z401 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.52■■■□□ 2
DENND4AQ7Z401 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
DENND4AQ7Z401 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
DENND4AQ7Z401 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.5■■□□□ 1.99
DENND4AQ7Z401 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
DENND4AQ7Z401 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
DENND4AQ7Z401 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
DENND4AQ7Z401 LINC00273-201ENST00000539813 1452 ntBASIC27.5■■□□□ 1.99
DENND4AQ7Z401 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
DENND4AQ7Z401 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
DENND4AQ7Z401 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
DENND4AQ7Z401 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.48■■□□□ 1.99
DENND4AQ7Z401 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
DENND4AQ7Z401 GPX1-201ENST00000419349 1106 ntBASIC27.46■■□□□ 1.99
DENND4AQ7Z401 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.46■■□□□ 1.99
DENND4AQ7Z401 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
DENND4AQ7Z401 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
DENND4AQ7Z401 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
DENND4AQ7Z401 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
DENND4AQ7Z401 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
DENND4AQ7Z401 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.44■■□□□ 1.98
DENND4AQ7Z401 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.44■■□□□ 1.98
DENND4AQ7Z401 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.44■■□□□ 1.98
DENND4AQ7Z401 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
DENND4AQ7Z401 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.43■■□□□ 1.98
DENND4AQ7Z401 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
DENND4AQ7Z401 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
DENND4AQ7Z401 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
DENND4AQ7Z401 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
DENND4AQ7Z401 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
DENND4AQ7Z401 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
DENND4AQ7Z401 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
DENND4AQ7Z401 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DENND4AQ7Z401 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
DENND4AQ7Z401 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
DENND4AQ7Z401 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.38■■□□□ 1.97
DENND4AQ7Z401 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DENND4AQ7Z401 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.36■■□□□ 1.97
DENND4AQ7Z401 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms