Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 AC019069.1-201ENST00000610008 1333 ntBASIC29.54■■■□□ 2.32
CHRDL2Q6WN34 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHRDL2Q6WN34 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.53■■■□□ 2.32
CHRDL2Q6WN34 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
CHRDL2Q6WN34 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
CHRDL2Q6WN34 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.51■■■□□ 2.31
CHRDL2Q6WN34 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHRDL2Q6WN34 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHRDL2Q6WN34 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHRDL2Q6WN34 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CHRDL2Q6WN34 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CHRDL2Q6WN34 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.48■■■□□ 2.31
CHRDL2Q6WN34 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHRDL2Q6WN34 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHRDL2Q6WN34 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHRDL2Q6WN34 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHRDL2Q6WN34 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CHRDL2Q6WN34 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
CHRDL2Q6WN34 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CHRDL2Q6WN34 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.41■■■□□ 2.3
CHRDL2Q6WN34 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.4■■■□□ 2.3
CHRDL2Q6WN34 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CHRDL2Q6WN34 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CHRDL2Q6WN34 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
CHRDL2Q6WN34 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.38■■■□□ 2.29
CHRDL2Q6WN34 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.38■■■□□ 2.29
CHRDL2Q6WN34 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CHRDL2Q6WN34 RARRES2P1-201ENST00000474487 481 ntBASIC29.37■■■□□ 2.29
CHRDL2Q6WN34 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
CHRDL2Q6WN34 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHRDL2Q6WN34 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.35■■■□□ 2.29
CHRDL2Q6WN34 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.34■■■□□ 2.29
CHRDL2Q6WN34 AL592295.1-201ENST00000400984 884 ntBASIC29.33■■■□□ 2.29
CHRDL2Q6WN34 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.33■■■□□ 2.29
CHRDL2Q6WN34 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.33■■■□□ 2.29
CHRDL2Q6WN34 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
CHRDL2Q6WN34 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.32■■■□□ 2.28
CHRDL2Q6WN34 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.32■■■□□ 2.28
CHRDL2Q6WN34 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.3■■■□□ 2.28
CHRDL2Q6WN34 AC022413.1-201ENST00000624602 984 ntBASIC29.3■■■□□ 2.28
CHRDL2Q6WN34 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
CHRDL2Q6WN34 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHRDL2Q6WN34 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.29■■■□□ 2.28
CHRDL2Q6WN34 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.29■■■□□ 2.28
CHRDL2Q6WN34 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CHRDL2Q6WN34 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CHRDL2Q6WN34 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHRDL2Q6WN34 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHRDL2Q6WN34 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHRDL2Q6WN34 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
CHRDL2Q6WN34 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHRDL2Q6WN34 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
CHRDL2Q6WN34 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHRDL2Q6WN34 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHRDL2Q6WN34 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHRDL2Q6WN34 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHRDL2Q6WN34 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHRDL2Q6WN34 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHRDL2Q6WN34 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHRDL2Q6WN34 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHRDL2Q6WN34 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.22■■■□□ 2.27
CHRDL2Q6WN34 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHRDL2Q6WN34 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.21■■■□□ 2.27
CHRDL2Q6WN34 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHRDL2Q6WN34 U85056.1-201ENST00000616429 682 ntBASIC29.21■■■□□ 2.27
CHRDL2Q6WN34 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHRDL2Q6WN34 TSPY13P-201ENST00000338964 914 ntBASIC29.19■■■□□ 2.26
CHRDL2Q6WN34 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHRDL2Q6WN34 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHRDL2Q6WN34 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHRDL2Q6WN34 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.17■■■□□ 2.26
CHRDL2Q6WN34 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHRDL2Q6WN34 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHRDL2Q6WN34 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CHRDL2Q6WN34 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHRDL2Q6WN34 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHRDL2Q6WN34 AC004987.1-201ENST00000428627 508 ntBASIC29.12■■■□□ 2.25
CHRDL2Q6WN34 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.12■■■□□ 2.25
CHRDL2Q6WN34 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.12■■■□□ 2.25
CHRDL2Q6WN34 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.12■■■□□ 2.25
CHRDL2Q6WN34 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.12■■■□□ 2.25
CHRDL2Q6WN34 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
CHRDL2Q6WN34 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHRDL2Q6WN34 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.09■■■□□ 2.25
CHRDL2Q6WN34 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.09■■■□□ 2.25
CHRDL2Q6WN34 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.08■■■□□ 2.25
CHRDL2Q6WN34 ATP5G2P3-201ENST00000429083 425 ntBASIC29.08■■■□□ 2.25
CHRDL2Q6WN34 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.08■■■□□ 2.25
CHRDL2Q6WN34 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.08■■■□□ 2.25
CHRDL2Q6WN34 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.08■■■□□ 2.25
CHRDL2Q6WN34 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHRDL2Q6WN34 AL035685.1-201ENST00000636663 812 ntBASIC29.05■■■□□ 2.24
CHRDL2Q6WN34 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHRDL2Q6WN34 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.04■■■□□ 2.24
CHRDL2Q6WN34 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
CHRDL2Q6WN34 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHRDL2Q6WN34 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29■■■□□ 2.23
CHRDL2Q6WN34 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29■■■□□ 2.23
CHRDL2Q6WN34 MIR935-201ENST00000401179 91 ntBASIC28.99■■■□□ 2.23
CHRDL2Q6WN34 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.99■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms