Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.42■■■□□ 2.62
CTR9Q6PD62 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.42■■■□□ 2.62
CTR9Q6PD62 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.42■■■□□ 2.62
CTR9Q6PD62 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.42■■■□□ 2.62
CTR9Q6PD62 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
CTR9Q6PD62 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CTR9Q6PD62 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.4■■■□□ 2.62
CTR9Q6PD62 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
CTR9Q6PD62 DUX4L29-201ENST00000425409 679 ntBASIC31.39■■■□□ 2.62
CTR9Q6PD62 AC021231.2-201ENST00000594613 730 ntBASIC31.39■■■□□ 2.62
CTR9Q6PD62 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
CTR9Q6PD62 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CTR9Q6PD62 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CTR9Q6PD62 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CTR9Q6PD62 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.36■■■□□ 2.61
CTR9Q6PD62 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CTR9Q6PD62 AC010864.1-201ENST00000609407 1511 ntBASIC31.36■■■□□ 2.61
CTR9Q6PD62 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.35■■■□□ 2.61
CTR9Q6PD62 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.34■■■□□ 2.61
CTR9Q6PD62 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CTR9Q6PD62 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.34■■■□□ 2.61
CTR9Q6PD62 ZNRF2P2-203ENST00000454624 420 ntBASIC31.33■■■□□ 2.61
CTR9Q6PD62 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CTR9Q6PD62 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.32■■■□□ 2.61
CTR9Q6PD62 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CTR9Q6PD62 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CTR9Q6PD62 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CTR9Q6PD62 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CTR9Q6PD62 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.3■■■□□ 2.6
CTR9Q6PD62 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CTR9Q6PD62 AL135925.1-201ENST00000605920 1701 ntBASIC31.29■■■□□ 2.6
CTR9Q6PD62 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CTR9Q6PD62 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CTR9Q6PD62 MIR7108-201ENST00000614319 87 ntBASIC31.28■■■□□ 2.6
CTR9Q6PD62 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.27■■■□□ 2.6
CTR9Q6PD62 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.59
CTR9Q6PD62 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.26■■■□□ 2.59
CTR9Q6PD62 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CTR9Q6PD62 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CTR9Q6PD62 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CTR9Q6PD62 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CTR9Q6PD62 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CTR9Q6PD62 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CTR9Q6PD62 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.25■■■□□ 2.59
CTR9Q6PD62 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CTR9Q6PD62 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CTR9Q6PD62 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CTR9Q6PD62 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CTR9Q6PD62 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.19■■■□□ 2.58
CTR9Q6PD62 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CTR9Q6PD62 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CTR9Q6PD62 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
CTR9Q6PD62 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CTR9Q6PD62 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.18■■■□□ 2.58
CTR9Q6PD62 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.17■■■□□ 2.58
CTR9Q6PD62 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
CTR9Q6PD62 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
CTR9Q6PD62 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CTR9Q6PD62 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
CTR9Q6PD62 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.15■■■□□ 2.58
CTR9Q6PD62 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
CTR9Q6PD62 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CTR9Q6PD62 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CTR9Q6PD62 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.14■■■□□ 2.58
CTR9Q6PD62 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CTR9Q6PD62 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
CTR9Q6PD62 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.12■■■□□ 2.57
CTR9Q6PD62 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.12■■■□□ 2.57
CTR9Q6PD62 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CTR9Q6PD62 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.12■■■□□ 2.57
CTR9Q6PD62 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CTR9Q6PD62 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
CTR9Q6PD62 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CTR9Q6PD62 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CTR9Q6PD62 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.1■■■□□ 2.57
CTR9Q6PD62 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.1■■■□□ 2.57
CTR9Q6PD62 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CTR9Q6PD62 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CTR9Q6PD62 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CTR9Q6PD62 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CTR9Q6PD62 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CTR9Q6PD62 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
CTR9Q6PD62 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CTR9Q6PD62 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CTR9Q6PD62 ST7-AS1-201ENST00000456775 1889 ntBASIC31.04■■■□□ 2.56
CTR9Q6PD62 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.04■■■□□ 2.56
CTR9Q6PD62 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CTR9Q6PD62 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CTR9Q6PD62 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CTR9Q6PD62 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CTR9Q6PD62 AC127502.1-201ENST00000399971 1502 ntBASIC31.02■■■□□ 2.56
CTR9Q6PD62 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CTR9Q6PD62 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
CTR9Q6PD62 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CTR9Q6PD62 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CTR9Q6PD62 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.01■■■□□ 2.55
CTR9Q6PD62 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.01■■■□□ 2.55
CTR9Q6PD62 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
CTR9Q6PD62 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CTR9Q6PD62 LINC01971-201ENST00000617888 1048 ntBASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms