Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 MIR3648-2-201ENST00000581792 180 ntBASIC29.77■■■□□ 2.36
NFRKBQ6P4R8 MIR3648-1-201ENST00000615959 180 ntBASIC29.77■■■□□ 2.36
NFRKBQ6P4R8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.76■■■□□ 2.35
NFRKBQ6P4R8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
NFRKBQ6P4R8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.75■■■□□ 2.35
NFRKBQ6P4R8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
NFRKBQ6P4R8 LINC01971-201ENST00000617888 1048 ntBASIC29.74■■■□□ 2.35
NFRKBQ6P4R8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
NFRKBQ6P4R8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NFRKBQ6P4R8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NFRKBQ6P4R8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.73■■■□□ 2.35
NFRKBQ6P4R8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.73■■■□□ 2.35
NFRKBQ6P4R8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NFRKBQ6P4R8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.72■■■□□ 2.35
NFRKBQ6P4R8 AC016575.1-201ENST00000607026 382 ntBASIC29.72■■■□□ 2.35
NFRKBQ6P4R8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NFRKBQ6P4R8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.71■■■□□ 2.35
NFRKBQ6P4R8 DUX4L11-201ENST00000611504 1267 ntBASIC29.71■■■□□ 2.35
NFRKBQ6P4R8 DUX4L12-201ENST00000614593 1267 ntBASIC29.71■■■□□ 2.35
NFRKBQ6P4R8 DUX4L14-201ENST00000621227 1267 ntBASIC29.71■■■□□ 2.35
NFRKBQ6P4R8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NFRKBQ6P4R8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
NFRKBQ6P4R8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
NFRKBQ6P4R8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.7■■■□□ 2.34
NFRKBQ6P4R8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
NFRKBQ6P4R8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
NFRKBQ6P4R8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.68■■■□□ 2.34
NFRKBQ6P4R8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NFRKBQ6P4R8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.68■■■□□ 2.34
NFRKBQ6P4R8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
NFRKBQ6P4R8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NFRKBQ6P4R8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NFRKBQ6P4R8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NFRKBQ6P4R8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NFRKBQ6P4R8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.65■■■□□ 2.34
NFRKBQ6P4R8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
NFRKBQ6P4R8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.65■■■□□ 2.34
NFRKBQ6P4R8 CR559946.2-201ENST00000623684 991 ntBASIC29.64■■■□□ 2.34
NFRKBQ6P4R8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
NFRKBQ6P4R8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.63■■■□□ 2.33
NFRKBQ6P4R8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.63■■■□□ 2.33
NFRKBQ6P4R8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
NFRKBQ6P4R8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NFRKBQ6P4R8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
NFRKBQ6P4R8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
NFRKBQ6P4R8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
NFRKBQ6P4R8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
NFRKBQ6P4R8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.6■■■□□ 2.33
NFRKBQ6P4R8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NFRKBQ6P4R8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.6■■■□□ 2.33
NFRKBQ6P4R8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.6■■■□□ 2.33
NFRKBQ6P4R8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NFRKBQ6P4R8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.58■■■□□ 2.33
NFRKBQ6P4R8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
NFRKBQ6P4R8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
NFRKBQ6P4R8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NFRKBQ6P4R8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NFRKBQ6P4R8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NFRKBQ6P4R8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
NFRKBQ6P4R8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
NFRKBQ6P4R8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.54■■■□□ 2.32
NFRKBQ6P4R8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.54■■■□□ 2.32
NFRKBQ6P4R8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.53■■■□□ 2.32
NFRKBQ6P4R8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
NFRKBQ6P4R8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NFRKBQ6P4R8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NFRKBQ6P4R8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
NFRKBQ6P4R8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.51■■■□□ 2.31
NFRKBQ6P4R8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
NFRKBQ6P4R8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NFRKBQ6P4R8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
NFRKBQ6P4R8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
NFRKBQ6P4R8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.48■■■□□ 2.31
NFRKBQ6P4R8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NFRKBQ6P4R8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NFRKBQ6P4R8 HSD17B1P1-201ENST00000590052 955 ntBASIC29.47■■■□□ 2.31
NFRKBQ6P4R8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NFRKBQ6P4R8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.46■■■□□ 2.31
NFRKBQ6P4R8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.46■■■□□ 2.31
NFRKBQ6P4R8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NFRKBQ6P4R8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NFRKBQ6P4R8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
NFRKBQ6P4R8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.44■■■□□ 2.3
NFRKBQ6P4R8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
NFRKBQ6P4R8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L13-201ENST00000554103 1267 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L15-201ENST00000611059 1267 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L23-201ENST00000615195 1269 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L24-201ENST00000617576 1269 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L22-201ENST00000618238 1269 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L20-201ENST00000619712 1269 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L21-201ENST00000622058 1269 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L10-201ENST00000622460 1267 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 DUX4L25-201ENST00000624915 1269 ntBASIC29.43■■■□□ 2.3
NFRKBQ6P4R8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NFRKBQ6P4R8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
NFRKBQ6P4R8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NFRKBQ6P4R8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NFRKBQ6P4R8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
NFRKBQ6P4R8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms