Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
CBWD3Q5JTY5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
CBWD3Q5JTY5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
CBWD3Q5JTY5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CBWD3Q5JTY5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
CBWD3Q5JTY5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CBWD3Q5JTY5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.53■■■□□ 2.16
CBWD3Q5JTY5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CBWD3Q5JTY5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CBWD3Q5JTY5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CBWD3Q5JTY5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.53■■■□□ 2.16
CBWD3Q5JTY5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CBWD3Q5JTY5 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.52■■■□□ 2.16
CBWD3Q5JTY5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CBWD3Q5JTY5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.51■■■□□ 2.15
CBWD3Q5JTY5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CBWD3Q5JTY5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CBWD3Q5JTY5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CBWD3Q5JTY5 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.5■■■□□ 2.15
CBWD3Q5JTY5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CBWD3Q5JTY5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CBWD3Q5JTY5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.49■■■□□ 2.15
CBWD3Q5JTY5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.49■■■□□ 2.15
CBWD3Q5JTY5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
CBWD3Q5JTY5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CBWD3Q5JTY5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
CBWD3Q5JTY5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CBWD3Q5JTY5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CBWD3Q5JTY5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CBWD3Q5JTY5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.48■■■□□ 2.15
CBWD3Q5JTY5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CBWD3Q5JTY5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CBWD3Q5JTY5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.47■■■□□ 2.15
CBWD3Q5JTY5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CBWD3Q5JTY5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
CBWD3Q5JTY5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CBWD3Q5JTY5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CBWD3Q5JTY5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CBWD3Q5JTY5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.45■■■□□ 2.14
CBWD3Q5JTY5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CBWD3Q5JTY5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
CBWD3Q5JTY5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.43■■■□□ 2.14
CBWD3Q5JTY5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
CBWD3Q5JTY5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CBWD3Q5JTY5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
CBWD3Q5JTY5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CBWD3Q5JTY5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CBWD3Q5JTY5 AC005559.1-201ENST00000589661 871 ntBASIC28.4■■■□□ 2.14
CBWD3Q5JTY5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CBWD3Q5JTY5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CBWD3Q5JTY5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CBWD3Q5JTY5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
CBWD3Q5JTY5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
CBWD3Q5JTY5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
CBWD3Q5JTY5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CBWD3Q5JTY5 DUX4L28-201ENST00000623687 678 ntBASIC28.36■■■□□ 2.13
CBWD3Q5JTY5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CBWD3Q5JTY5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CBWD3Q5JTY5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CBWD3Q5JTY5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.35■■■□□ 2.13
CBWD3Q5JTY5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
CBWD3Q5JTY5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.35■■■□□ 2.13
CBWD3Q5JTY5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CBWD3Q5JTY5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.34■■■□□ 2.13
CBWD3Q5JTY5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.34■■■□□ 2.13
CBWD3Q5JTY5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CBWD3Q5JTY5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CBWD3Q5JTY5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CBWD3Q5JTY5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.33■■■□□ 2.13
CBWD3Q5JTY5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.33■■■□□ 2.13
CBWD3Q5JTY5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CBWD3Q5JTY5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CBWD3Q5JTY5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
CBWD3Q5JTY5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.32■■■□□ 2.12
CBWD3Q5JTY5 AL139393.2-201ENST00000608721 2025 ntBASIC28.32■■■□□ 2.12
CBWD3Q5JTY5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.32■■■□□ 2.12
CBWD3Q5JTY5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
CBWD3Q5JTY5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CBWD3Q5JTY5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CBWD3Q5JTY5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CBWD3Q5JTY5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
CBWD3Q5JTY5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.3■■■□□ 2.12
CBWD3Q5JTY5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.29■■■□□ 2.12
CBWD3Q5JTY5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.29■■■□□ 2.12
CBWD3Q5JTY5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CBWD3Q5JTY5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
CBWD3Q5JTY5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.29■■■□□ 2.12
CBWD3Q5JTY5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.29■■■□□ 2.12
CBWD3Q5JTY5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.28■■■□□ 2.12
CBWD3Q5JTY5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.28■■■□□ 2.12
CBWD3Q5JTY5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CBWD3Q5JTY5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.25■■■□□ 2.11
CBWD3Q5JTY5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.25■■■□□ 2.11
CBWD3Q5JTY5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CBWD3Q5JTY5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CBWD3Q5JTY5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.25■■■□□ 2.11
CBWD3Q5JTY5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.24■■■□□ 2.11
CBWD3Q5JTY5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.24■■■□□ 2.11
CBWD3Q5JTY5 AP006261.1-201ENST00000584783 668 ntBASIC28.24■■■□□ 2.11
CBWD3Q5JTY5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms