Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.22■□□□□ 0.83
TM4SF20Q53R12 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF20Q53R12 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF20Q53R12 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF20Q53R12 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF20Q53R12 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TM4SF20Q53R12 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF20Q53R12 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.18■□□□□ 0.82
TM4SF20Q53R12 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.18■□□□□ 0.82
TM4SF20Q53R12 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF20Q53R12 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF20Q53R12 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF20Q53R12 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF20Q53R12 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.17■□□□□ 0.82
TM4SF20Q53R12 ST7-AS1-201ENST00000456775 1889 ntBASIC20.17■□□□□ 0.82
TM4SF20Q53R12 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TM4SF20Q53R12 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TM4SF20Q53R12 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.16■□□□□ 0.82
TM4SF20Q53R12 DUX4L28-201ENST00000623687 678 ntBASIC20.16■□□□□ 0.82
TM4SF20Q53R12 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF20Q53R12 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.16■□□□□ 0.82
TM4SF20Q53R12 MIR3665-201ENST00000578708 105 ntBASIC20.15■□□□□ 0.82
TM4SF20Q53R12 AP006261.1-201ENST00000584783 668 ntBASIC20.15■□□□□ 0.82
TM4SF20Q53R12 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF20Q53R12 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TM4SF20Q53R12 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
TM4SF20Q53R12 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF20Q53R12 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF20Q53R12 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF20Q53R12 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF20Q53R12 AC010864.1-201ENST00000609407 1511 ntBASIC20.12■□□□□ 0.81
TM4SF20Q53R12 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF20Q53R12 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.12■□□□□ 0.81
TM4SF20Q53R12 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF20Q53R12 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF20Q53R12 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF20Q53R12 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TM4SF20Q53R12 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF20Q53R12 AC139426.1-201ENST00000568218 2529 ntBASIC20.11■□□□□ 0.81
TM4SF20Q53R12 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF20Q53R12 AL162393.1-201ENST00000437852 946 ntBASIC20.11■□□□□ 0.81
TM4SF20Q53R12 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF20Q53R12 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF20Q53R12 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF20Q53R12 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF20Q53R12 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF20Q53R12 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
TM4SF20Q53R12 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF20Q53R12 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TM4SF20Q53R12 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF20Q53R12 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF20Q53R12 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.09■□□□□ 0.81
TM4SF20Q53R12 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF20Q53R12 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.09■□□□□ 0.81
TM4SF20Q53R12 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF20Q53R12 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF20Q53R12 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF20Q53R12 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF20Q53R12 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF20Q53R12 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF20Q53R12 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF20Q53R12 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF20Q53R12 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF20Q53R12 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF20Q53R12 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TM4SF20Q53R12 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF20Q53R12 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF20Q53R12 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.07■□□□□ 0.8
TM4SF20Q53R12 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF20Q53R12 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF20Q53R12 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF20Q53R12 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF20Q53R12 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF20Q53R12 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF20Q53R12 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.05■□□□□ 0.8
TM4SF20Q53R12 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF20Q53R12 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF20Q53R12 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.04■□□□□ 0.8
TM4SF20Q53R12 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.04■□□□□ 0.8
TM4SF20Q53R12 AC087741.3-201ENST00000624270 1347 ntBASIC20.03■□□□□ 0.8
TM4SF20Q53R12 RPS2P35-201ENST00000443417 897 ntBASIC20.03■□□□□ 0.8
TM4SF20Q53R12 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF20Q53R12 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF20Q53R12 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TM4SF20Q53R12 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
TM4SF20Q53R12 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF20Q53R12 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF20Q53R12 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TM4SF20Q53R12 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF20Q53R12 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF20Q53R12 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20■□□□□ 0.79
TM4SF20Q53R12 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF20Q53R12 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF20Q53R12 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF20Q53R12 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TM4SF20Q53R12 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF20Q53R12 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
TM4SF20Q53R12 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF20Q53R12 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF20Q53R12 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms