Protein–RNA interactions for Protein: Q4G0N8

SLC9C1, Sodium/hydrogen exchanger 10, humanhuman

Predictions only

Length 1,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9C1Q4G0N8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L13-201ENST00000554103 1267 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L15-201ENST00000611059 1267 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L23-201ENST00000615195 1269 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L24-201ENST00000617576 1269 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L22-201ENST00000618238 1269 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L20-201ENST00000619712 1269 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L21-201ENST00000622058 1269 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L10-201ENST00000622460 1267 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 DUX4L25-201ENST00000624915 1269 ntBASIC30.6■■■□□ 2.49
SLC9C1Q4G0N8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.59■■■□□ 2.49
SLC9C1Q4G0N8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SLC9C1Q4G0N8 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.57■■■□□ 2.48
SLC9C1Q4G0N8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SLC9C1Q4G0N8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC9C1Q4G0N8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC9C1Q4G0N8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.55■■■□□ 2.48
SLC9C1Q4G0N8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.55■■■□□ 2.48
SLC9C1Q4G0N8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
SLC9C1Q4G0N8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC9C1Q4G0N8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.54■■■□□ 2.48
SLC9C1Q4G0N8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
SLC9C1Q4G0N8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC9C1Q4G0N8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SLC9C1Q4G0N8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SLC9C1Q4G0N8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.5■■■□□ 2.47
SLC9C1Q4G0N8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.5■■■□□ 2.47
SLC9C1Q4G0N8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC9C1Q4G0N8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC9C1Q4G0N8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.49■■■□□ 2.47
SLC9C1Q4G0N8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
SLC9C1Q4G0N8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
SLC9C1Q4G0N8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC9C1Q4G0N8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.47■■■□□ 2.47
SLC9C1Q4G0N8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SLC9C1Q4G0N8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC9C1Q4G0N8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC9C1Q4G0N8 GPX1-201ENST00000419349 1106 ntBASIC30.46■■■□□ 2.47
SLC9C1Q4G0N8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.46■■■□□ 2.47
SLC9C1Q4G0N8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC9C1Q4G0N8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.46■■■□□ 2.47
SLC9C1Q4G0N8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SLC9C1Q4G0N8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
SLC9C1Q4G0N8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.45■■■□□ 2.46
SLC9C1Q4G0N8 RNF126P1-201ENST00000567452 1320 ntBASIC30.42■■■□□ 2.46
SLC9C1Q4G0N8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SLC9C1Q4G0N8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.41■■■□□ 2.46
SLC9C1Q4G0N8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SLC9C1Q4G0N8 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.4■■■□□ 2.46
SLC9C1Q4G0N8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SLC9C1Q4G0N8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SLC9C1Q4G0N8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
SLC9C1Q4G0N8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC9C1Q4G0N8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SLC9C1Q4G0N8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
SLC9C1Q4G0N8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.37■■■□□ 2.45
SLC9C1Q4G0N8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.37■■■□□ 2.45
SLC9C1Q4G0N8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SLC9C1Q4G0N8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SLC9C1Q4G0N8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.37■■■□□ 2.45
SLC9C1Q4G0N8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SLC9C1Q4G0N8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC9C1Q4G0N8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC9C1Q4G0N8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.36■■■□□ 2.45
SLC9C1Q4G0N8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
SLC9C1Q4G0N8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SLC9C1Q4G0N8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SLC9C1Q4G0N8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC9C1Q4G0N8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.33■■■□□ 2.45
SLC9C1Q4G0N8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
SLC9C1Q4G0N8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC9C1Q4G0N8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
SLC9C1Q4G0N8 AC012354.3-201ENST00000623734 483 ntBASIC30.32■■■□□ 2.44
SLC9C1Q4G0N8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
SLC9C1Q4G0N8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SLC9C1Q4G0N8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
SLC9C1Q4G0N8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.3■■■□□ 2.44
SLC9C1Q4G0N8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC9C1Q4G0N8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.28■■■□□ 2.44
SLC9C1Q4G0N8 NTF6A-201ENST00000591175 560 ntBASIC30.28■■■□□ 2.44
SLC9C1Q4G0N8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SLC9C1Q4G0N8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.28■■■□□ 2.44
SLC9C1Q4G0N8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SLC9C1Q4G0N8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
SLC9C1Q4G0N8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
SLC9C1Q4G0N8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SLC9C1Q4G0N8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.27■■■□□ 2.44
SLC9C1Q4G0N8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SLC9C1Q4G0N8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SLC9C1Q4G0N8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms