Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
RFX7Q2KHR2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RFX7Q2KHR2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.15■■■□□ 2.74
RFX7Q2KHR2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RFX7Q2KHR2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.14■■■□□ 2.74
RFX7Q2KHR2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RFX7Q2KHR2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.12■■■□□ 2.73
RFX7Q2KHR2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RFX7Q2KHR2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.1■■■□□ 2.73
RFX7Q2KHR2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.1■■■□□ 2.73
RFX7Q2KHR2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RFX7Q2KHR2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.09■■■□□ 2.73
RFX7Q2KHR2 AL135925.1-201ENST00000605920 1701 ntBASIC32.09■■■□□ 2.73
RFX7Q2KHR2 ZNRF2P2-203ENST00000454624 420 ntBASIC32.08■■■□□ 2.73
RFX7Q2KHR2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.73
RFX7Q2KHR2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.06■■■□□ 2.72
RFX7Q2KHR2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
RFX7Q2KHR2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RFX7Q2KHR2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RFX7Q2KHR2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.05■■■□□ 2.72
RFX7Q2KHR2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RFX7Q2KHR2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.03■■■□□ 2.72
RFX7Q2KHR2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
RFX7Q2KHR2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.03■■■□□ 2.72
RFX7Q2KHR2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RFX7Q2KHR2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
RFX7Q2KHR2 ST7-AS1-201ENST00000456775 1889 ntBASIC32.02■■■□□ 2.72
RFX7Q2KHR2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.02■■■□□ 2.72
RFX7Q2KHR2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32■■■□□ 2.71
RFX7Q2KHR2 MIR6090-201ENST00000622481 60 ntBASIC32■■■□□ 2.71
RFX7Q2KHR2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
RFX7Q2KHR2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
RFX7Q2KHR2 AC021231.2-201ENST00000594613 730 ntBASIC31.98■■■□□ 2.71
RFX7Q2KHR2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
RFX7Q2KHR2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
RFX7Q2KHR2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RFX7Q2KHR2 DUX4L29-201ENST00000425409 679 ntBASIC31.95■■■□□ 2.71
RFX7Q2KHR2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
RFX7Q2KHR2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
RFX7Q2KHR2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 AC010864.1-201ENST00000609407 1511 ntBASIC31.94■■■□□ 2.7
RFX7Q2KHR2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RFX7Q2KHR2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
RFX7Q2KHR2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RFX7Q2KHR2 AC108673.1-201ENST00000510422 1159 ntBASIC31.93■■■□□ 2.7
RFX7Q2KHR2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RFX7Q2KHR2 HLA-V-202ENST00000446817 847 ntBASIC31.92■■■□□ 2.7
RFX7Q2KHR2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RFX7Q2KHR2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RFX7Q2KHR2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
RFX7Q2KHR2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
RFX7Q2KHR2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
RFX7Q2KHR2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RFX7Q2KHR2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RFX7Q2KHR2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
RFX7Q2KHR2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RFX7Q2KHR2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
RFX7Q2KHR2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
RFX7Q2KHR2 ABCB10P1-201ENST00000614297 2181 ntBASIC31.86■■■□□ 2.69
RFX7Q2KHR2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
RFX7Q2KHR2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RFX7Q2KHR2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.85■■■□□ 2.69
RFX7Q2KHR2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.84■■■□□ 2.69
RFX7Q2KHR2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
RFX7Q2KHR2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
RFX7Q2KHR2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RFX7Q2KHR2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.83■■■□□ 2.69
RFX7Q2KHR2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RFX7Q2KHR2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
RFX7Q2KHR2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
RFX7Q2KHR2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.69
RFX7Q2KHR2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.82■■■□□ 2.68
RFX7Q2KHR2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.82■■■□□ 2.68
RFX7Q2KHR2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
RFX7Q2KHR2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
RFX7Q2KHR2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.81■■■□□ 2.68
RFX7Q2KHR2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.81■■■□□ 2.68
RFX7Q2KHR2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RFX7Q2KHR2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.79■■■□□ 2.68
RFX7Q2KHR2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
RFX7Q2KHR2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.78■■■□□ 2.68
RFX7Q2KHR2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms