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Protein–RNA interactions for Protein: Q03790
NUP53, Nucleoporin NUP53, yeast
Predictions only
Length
475 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
NUP53
Q03790
tA(AGC)G
tA(AGC)G
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
tA(AGC)H
tA(AGC)H
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
tA(AGC)J
tA(AGC)J
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
tA(AGC)K1
tA(AGC)K1
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
tA(AGC)K2
tA(AGC)K2
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
tA(AGC)L
tA(AGC)L
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
tA(AGC)M1
tA(AGC)M1
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
tA(AGC)M2
tA(AGC)M2
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
TVP23
YDR084C
600 nt
7.9
□□□□□ -1.14
NUP53
Q03790
tA(AGC)P
tA(AGC)P
73 nt
7.9
□□□□□ -1.14
NUP53
Q03790
YFR036W-A
YFR036W-A
651 nt
7.9
□□□□□ -1.14
NUP53
Q03790
CDD1
YLR245C
429 nt
7.9
□□□□□ -1.14
NUP53
Q03790
SAM50
YNL026W
1455 nt
7.89
□□□□□ -1.15
NUP53
Q03790
VPS62
YGR141W
1404 nt
7.89
□□□□□ -1.15
NUP53
Q03790
ASP3-1
YLR155C
1089 nt
7.89
□□□□□ -1.15
NUP53
Q03790
ASP3-2
YLR157C
1089 nt
7.89
□□□□□ -1.15
NUP53
Q03790
ASP3-3
YLR158C
1089 nt
7.89
□□□□□ -1.15
NUP53
Q03790
ASP3-4
YLR160C
1089 nt
7.89
□□□□□ -1.15
NUP53
Q03790
NME1
NME1
340 nt
7.89
□□□□□ -1.15
NUP53
Q03790
TAT2
YOL020W
1779 nt
7.89
□□□□□ -1.15
NUP53
Q03790
YCR025C
YCR025C
411 nt
7.88
□□□□□ -1.15
NUP53
Q03790
ADE8
YDR408C
645 nt
7.88
□□□□□ -1.15
NUP53
Q03790
THP3
YPR045C
1413 nt
7.87
□□□□□ -1.15
NUP53
Q03790
POP2
YNR052C
1302 nt
7.87
□□□□□ -1.15
NUP53
Q03790
ABZ2
YMR289W
1125 nt
7.87
□□□□□ -1.15
NUP53
Q03790
YDL086W
YDL086W
822 nt
7.86
□□□□□ -1.15
NUP53
Q03790
YDR455C
YDR455C
309 nt
7.86
□□□□□ -1.15
NUP53
Q03790
NAS2
YIL007C
663 nt
7.86
□□□□□ -1.15
NUP53
Q03790
FSH2
YMR222C
672 nt
7.86
□□□□□ -1.15
NUP53
Q03790
SWM1
YDR260C
513 nt
7.85
□□□□□ -1.15
NUP53
Q03790
KRE1
YNL322C
942 nt
7.85
□□□□□ -1.15
NUP53
Q03790
HMG2
YLR450W
3138 nt
7.85
□□□□□ -1.15
NUP53
Q03790
ERG13
YML126C
1476 nt
7.84
□□□□□ -1.15
NUP53
Q03790
FLX1
YIL134W
936 nt
7.83
□□□□□ -1.16
NUP53
Q03790
MAE1
YKL029C
2010 nt
7.83
□□□□□ -1.16
NUP53
Q03790
ACO2
YJL200C
2370 nt
7.82
□□□□□ -1.16
NUP53
Q03790
YER152W-A
YER152W-A
567 nt
7.82
□□□□□ -1.16
NUP53
Q03790
QDR2
YIL121W
1629 nt
7.81
□□□□□ -1.16
NUP53
Q03790
ESBP6
YNL125C
2022 nt
7.81
□□□□□ -1.16
NUP53
Q03790
TPO4
YOR273C
1980 nt
7.8
□□□□□ -1.16
NUP53
Q03790
YGR139W
YGR139W
339 nt
7.8
□□□□□ -1.16
NUP53
Q03790
OPI3
YJR073C
621 nt
7.79
□□□□□ -1.16
NUP53
Q03790
MAS1
YLR163C
1389 nt
7.79
□□□□□ -1.16
NUP53
Q03790
YMR007W
YMR007W
381 nt
7.78
□□□□□ -1.16
NUP53
Q03790
LYS20
YDL182W
1287 nt
7.77
□□□□□ -1.17
NUP53
Q03790
ENT4
YLL038C
744 nt
7.77
□□□□□ -1.17
NUP53
Q03790
PHB2
YGR231C
933 nt
7.76
□□□□□ -1.17
NUP53
Q03790
CYC3
YAL039C
810 nt
7.76
□□□□□ -1.17
NUP53
Q03790
RCR1
YBR005W
642 nt
7.76
□□□□□ -1.17
NUP53
Q03790
AMF1
YOR378W
1548 nt
7.75
□□□□□ -1.17
NUP53
Q03790
YIL100C-A
YIL100C-A
339 nt
7.75
□□□□□ -1.17
NUP53
Q03790
SPE2
YOL052C
1191 nt
7.75
□□□□□ -1.17
NUP53
Q03790
SER2
YGR208W
930 nt
7.74
□□□□□ -1.17
NUP53
Q03790
ADH3
YMR083W
1128 nt
7.74
□□□□□ -1.17
NUP53
Q03790
BET2
YPR176C
978 nt
7.74
□□□□□ -1.17
NUP53
Q03790
INA1
YLR413W
2028 nt
7.74
□□□□□ -1.17
NUP53
Q03790
MCM5
YLR274W
2328 nt
7.74
□□□□□ -1.17
NUP53
Q03790
RIM8
YGL045W
1629 nt
7.74
□□□□□ -1.17
NUP53
Q03790
SAC7
YDR389W
1965 nt
7.73
□□□□□ -1.17
NUP53
Q03790
ENO2
YHR174W
1314 nt
7.73
□□□□□ -1.17
NUP53
Q03790
LSB6
YJL100W
1824 nt
7.73
□□□□□ -1.17
NUP53
Q03790
HTS1
YPR033C
1641 nt
7.72
□□□□□ -1.17
NUP53
Q03790
PCP1
YGR101W
1041 nt
7.72
□□□□□ -1.17
NUP53
Q03790
AIM1
YAL046C
357 nt
7.72
□□□□□ -1.17
NUP53
Q03790
BUD20
YLR074C
501 nt
7.71
□□□□□ -1.18
NUP53
Q03790
LEU2
YCL018W
1095 nt
7.71
□□□□□ -1.18
NUP53
Q03790
DIG1
YPL049C
1359 nt
7.71
□□□□□ -1.18
NUP53
Q03790
YGL114W
YGL114W
2178 nt
7.7
□□□□□ -1.18
NUP53
Q03790
TPC1
YGR096W
945 nt
7.7
□□□□□ -1.18
NUP53
Q03790
MOB1
YIL106W
945 nt
7.7
□□□□□ -1.18
NUP53
Q03790
SRP102
YKL154W
735 nt
7.7
□□□□□ -1.18
NUP53
Q03790
YNR064C
YNR064C
873 nt
7.7
□□□□□ -1.18
NUP53
Q03790
CCT2
YIL142W
1584 nt
7.68
□□□□□ -1.18
NUP53
Q03790
OPI10
YOL032W
741 nt
7.68
□□□□□ -1.18
NUP53
Q03790
DTR1
YBR180W
1719 nt
7.68
□□□□□ -1.18
NUP53
Q03790
ILV3
YJR016C
1758 nt
7.68
□□□□□ -1.18
NUP53
Q03790
URA8
YJR103W
1737 nt
7.67
□□□□□ -1.18
NUP53
Q03790
SPT20
YOL148C
1815 nt
7.66
□□□□□ -1.18
NUP53
Q03790
ILV2
YMR108W
2064 nt
7.66
□□□□□ -1.18
NUP53
Q03790
YKR012C
YKR012C
378 nt
7.65
□□□□□ -1.18
NUP53
Q03790
SDS24
YBR214W
1584 nt
7.65
□□□□□ -1.18
NUP53
Q03790
RPC82
YPR190C
1965 nt
7.64
□□□□□ -1.19
NUP53
Q03790
ENO1
YGR254W
1314 nt
7.64
□□□□□ -1.19
NUP53
Q03790
YLR046C
YLR046C
813 nt
7.64
□□□□□ -1.19
NUP53
Q03790
YOR343C
YOR343C
327 nt
7.64
□□□□□ -1.19
NUP53
Q03790
Q0010
Q0010
387 nt
7.64
□□□□□ -1.19
NUP53
Q03790
KEL3
YPL263C
1956 nt
7.64
□□□□□ -1.19
NUP53
Q03790
GTB1
YDR221W
2109 nt
7.63
□□□□□ -1.19
NUP53
Q03790
NAM8
YHR086W
1572 nt
7.63
□□□□□ -1.19
NUP53
Q03790
RPL12B
YDR418W
498 nt
7.62
□□□□□ -1.19
NUP53
Q03790
SWT21
YNL187W
1074 nt
7.62
□□□□□ -1.19
NUP53
Q03790
YGR210C
YGR210C
1236 nt
7.61
□□□□□ -1.19
NUP53
Q03790
PAU21
YOR394W
495 nt
7.61
□□□□□ -1.19
NUP53
Q03790
PAU22
YPL282C
495 nt
7.61
□□□□□ -1.19
NUP53
Q03790
ERO1
YML130C
1692 nt
7.6
□□□□□ -1.19
NUP53
Q03790
VBA3
YCL069W
1377 nt
7.6
□□□□□ -1.19
NUP53
Q03790
YOR325W
YOR325W
474 nt
7.6
□□□□□ -1.19
NUP53
Q03790
HEM14
YER014W
1620 nt
7.6
□□□□□ -1.19
NUP53
Q03790
RFC1
YOR217W
2586 nt
7.59
□□□□□ -1.19
NUP53
Q03790
HRA1
HRA1
564 nt
7.59
□□□□□ -1.19
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Retrieved 100 of 7,029 protein–RNA pairs in 15 ms