Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CLCNKAP51800 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CLCNKAP51800 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLCNKAP51800 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLCNKAP51800 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLCNKAP51800 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.85■■□□□ 1.73
CLCNKAP51800 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.85■■□□□ 1.73
CLCNKAP51800 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.85■■□□□ 1.73
CLCNKAP51800 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.85■■□□□ 1.73
CLCNKAP51800 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.85■■□□□ 1.73
CLCNKAP51800 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLCNKAP51800 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.84■■□□□ 1.73
CLCNKAP51800 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.84■■□□□ 1.73
CLCNKAP51800 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLCNKAP51800 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.83■■□□□ 1.73
CLCNKAP51800 DUX4L29-201ENST00000425409 679 ntBASIC25.83■■□□□ 1.73
CLCNKAP51800 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
CLCNKAP51800 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLCNKAP51800 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.82■■□□□ 1.72
CLCNKAP51800 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLCNKAP51800 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CLCNKAP51800 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.81■■□□□ 1.72
CLCNKAP51800 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.8■■□□□ 1.72
CLCNKAP51800 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.79■■□□□ 1.72
CLCNKAP51800 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CLCNKAP51800 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
CLCNKAP51800 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CLCNKAP51800 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.78■■□□□ 1.72
CLCNKAP51800 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CLCNKAP51800 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CLCNKAP51800 AC021231.2-201ENST00000594613 730 ntBASIC25.77■■□□□ 1.72
CLCNKAP51800 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CLCNKAP51800 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CLCNKAP51800 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CLCNKAP51800 AC010864.1-201ENST00000609407 1511 ntBASIC25.76■■□□□ 1.71
CLCNKAP51800 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CLCNKAP51800 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CLCNKAP51800 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CLCNKAP51800 AL135925.1-201ENST00000605920 1701 ntBASIC25.74■■□□□ 1.71
CLCNKAP51800 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CLCNKAP51800 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.74■■□□□ 1.71
CLCNKAP51800 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLCNKAP51800 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLCNKAP51800 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLCNKAP51800 ZNRF2P2-203ENST00000454624 420 ntBASIC25.73■■□□□ 1.71
CLCNKAP51800 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CLCNKAP51800 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.73■■□□□ 1.71
CLCNKAP51800 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLCNKAP51800 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.71■■□□□ 1.71
CLCNKAP51800 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
CLCNKAP51800 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLCNKAP51800 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.69■■□□□ 1.7
CLCNKAP51800 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.69■■□□□ 1.7
CLCNKAP51800 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLCNKAP51800 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.68■■□□□ 1.7
CLCNKAP51800 MIR7108-201ENST00000614319 87 ntBASIC25.68■■□□□ 1.7
CLCNKAP51800 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLCNKAP51800 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.67■■□□□ 1.7
CLCNKAP51800 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLCNKAP51800 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLCNKAP51800 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CLCNKAP51800 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.65■■□□□ 1.7
CLCNKAP51800 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.64■■□□□ 1.7
CLCNKAP51800 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CLCNKAP51800 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLCNKAP51800 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.63■■□□□ 1.69
CLCNKAP51800 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CLCNKAP51800 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CLCNKAP51800 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CLCNKAP51800 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CLCNKAP51800 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CLCNKAP51800 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.61■■□□□ 1.69
CLCNKAP51800 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CLCNKAP51800 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CLCNKAP51800 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CLCNKAP51800 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CLCNKAP51800 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.6■■□□□ 1.69
CLCNKAP51800 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.6■■□□□ 1.69
CLCNKAP51800 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CLCNKAP51800 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.59■■□□□ 1.69
CLCNKAP51800 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CLCNKAP51800 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CLCNKAP51800 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
CLCNKAP51800 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.57■■□□□ 1.68
CLCNKAP51800 ST7-AS1-201ENST00000456775 1889 ntBASIC25.57■■□□□ 1.68
CLCNKAP51800 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLCNKAP51800 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CLCNKAP51800 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.56■■□□□ 1.68
CLCNKAP51800 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLCNKAP51800 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLCNKAP51800 LINC01971-201ENST00000617888 1048 ntBASIC25.55■■□□□ 1.68
CLCNKAP51800 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLCNKAP51800 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CLCNKAP51800 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLCNKAP51800 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLCNKAP51800 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CLCNKAP51800 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLCNKAP51800 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLCNKAP51800 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLCNKAP51800 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms