Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC33.28■■■□□ 2.92
KCNA3P22001 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
KCNA3P22001 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC33.27■■■□□ 2.92
KCNA3P22001 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
KCNA3P22001 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
KCNA3P22001 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
KCNA3P22001 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
KCNA3P22001 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
KCNA3P22001 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
KCNA3P22001 CHML-204ENST00000638121 920 ntTSL 2 BASIC33.26■■■□□ 2.91
KCNA3P22001 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
KCNA3P22001 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
KCNA3P22001 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
KCNA3P22001 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
KCNA3P22001 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
KCNA3P22001 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.23■■■□□ 2.91
KCNA3P22001 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
KCNA3P22001 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
KCNA3P22001 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
KCNA3P22001 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.91
KCNA3P22001 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
KCNA3P22001 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
KCNA3P22001 GPX1-201ENST00000419349 1106 ntBASIC33.19■■■□□ 2.9
KCNA3P22001 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
KCNA3P22001 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
KCNA3P22001 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
KCNA3P22001 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
KCNA3P22001 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
KCNA3P22001 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
KCNA3P22001 RNF126P1-201ENST00000567452 1320 ntBASIC33.16■■■□□ 2.9
KCNA3P22001 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
KCNA3P22001 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
KCNA3P22001 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
KCNA3P22001 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC33.14■■■□□ 2.9
KCNA3P22001 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
KCNA3P22001 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
KCNA3P22001 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
KCNA3P22001 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC33.1■■■□□ 2.89
KCNA3P22001 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
KCNA3P22001 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
KCNA3P22001 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.09■■■□□ 2.89
KCNA3P22001 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
KCNA3P22001 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.08■■■□□ 2.89
KCNA3P22001 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
KCNA3P22001 EI24-212ENST00000615917 1407 ntTSL 2 BASIC33.07■■■□□ 2.88
KCNA3P22001 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
KCNA3P22001 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
KCNA3P22001 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
KCNA3P22001 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
KCNA3P22001 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
KCNA3P22001 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC33.04■■■□□ 2.88
KCNA3P22001 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.87
KCNA3P22001 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.99■■■□□ 2.87
KCNA3P22001 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
KCNA3P22001 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.99■■■□□ 2.87
KCNA3P22001 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.99■■■□□ 2.87
KCNA3P22001 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
KCNA3P22001 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
KCNA3P22001 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.97■■■□□ 2.87
KCNA3P22001 NTF6A-201ENST00000591175 560 ntBASIC32.97■■■□□ 2.87
KCNA3P22001 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.97■■■□□ 2.87
KCNA3P22001 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
KCNA3P22001 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.95■■■□□ 2.87
KCNA3P22001 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
KCNA3P22001 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.94■■■□□ 2.86
KCNA3P22001 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.93■■■□□ 2.86
KCNA3P22001 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
KCNA3P22001 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.93■■■□□ 2.86
KCNA3P22001 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
KCNA3P22001 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.93■■■□□ 2.86
KCNA3P22001 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
KCNA3P22001 AC012354.3-201ENST00000623734 483 ntBASIC32.92■■■□□ 2.86
KCNA3P22001 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.91■■■□□ 2.86
KCNA3P22001 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
KCNA3P22001 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
KCNA3P22001 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
KCNA3P22001 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
KCNA3P22001 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.88■■■□□ 2.85
KCNA3P22001 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
KCNA3P22001 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
KCNA3P22001 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
KCNA3P22001 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
KCNA3P22001 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
KCNA3P22001 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.84■■■□□ 2.85
KCNA3P22001 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.84■■■□□ 2.85
KCNA3P22001 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
KCNA3P22001 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.83■■■□□ 2.85
KCNA3P22001 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
KCNA3P22001 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.82■■■□□ 2.84
KCNA3P22001 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
KCNA3P22001 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.81■■■□□ 2.84
KCNA3P22001 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
KCNA3P22001 AC022413.1-201ENST00000624602 984 ntBASIC32.8■■■□□ 2.84
KCNA3P22001 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
KCNA3P22001 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
KCNA3P22001 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
KCNA3P22001 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.77■■■□□ 2.84
KCNA3P22001 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
KCNA3P22001 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.75■■■□□ 2.83
KCNA3P22001 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 237 ms