Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL1A2P08123 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
COL1A2P08123 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
COL1A2P08123 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
COL1A2P08123 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.28■■■□□ 2.28
COL1A2P08123 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
COL1A2P08123 HLA-V-202ENST00000446817 847 ntBASIC29.27■■■□□ 2.28
COL1A2P08123 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
COL1A2P08123 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL1A2P08123 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL1A2P08123 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL1A2P08123 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.25■■■□□ 2.27
COL1A2P08123 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.25■■■□□ 2.27
COL1A2P08123 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL1A2P08123 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COL1A2P08123 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.24■■■□□ 2.27
COL1A2P08123 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.24■■■□□ 2.27
COL1A2P08123 LINC01971-201ENST00000617888 1048 ntBASIC29.24■■■□□ 2.27
COL1A2P08123 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL1A2P08123 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.22■■■□□ 2.27
COL1A2P08123 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL1A2P08123 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.22■■■□□ 2.27
COL1A2P08123 AC010864.1-201ENST00000609407 1511 ntBASIC29.2■■■□□ 2.27
COL1A2P08123 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
COL1A2P08123 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL1A2P08123 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.18■■■□□ 2.26
COL1A2P08123 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.18■■■□□ 2.26
COL1A2P08123 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
COL1A2P08123 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.17■■■□□ 2.26
COL1A2P08123 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.17■■■□□ 2.26
COL1A2P08123 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COL1A2P08123 DUX4L11-201ENST00000611504 1267 ntBASIC29.15■■■□□ 2.26
COL1A2P08123 DUX4L12-201ENST00000614593 1267 ntBASIC29.15■■■□□ 2.26
COL1A2P08123 DUX4L14-201ENST00000621227 1267 ntBASIC29.15■■■□□ 2.26
COL1A2P08123 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
COL1A2P08123 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.14■■■□□ 2.26
COL1A2P08123 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.14■■■□□ 2.26
COL1A2P08123 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL1A2P08123 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL1A2P08123 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
COL1A2P08123 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.13■■■□□ 2.25
COL1A2P08123 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.13■■■□□ 2.25
COL1A2P08123 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
COL1A2P08123 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL1A2P08123 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
COL1A2P08123 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
COL1A2P08123 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL1A2P08123 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.11■■■□□ 2.25
COL1A2P08123 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.11■■■□□ 2.25
COL1A2P08123 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
COL1A2P08123 MIR3648-2-201ENST00000581792 180 ntBASIC29.1■■■□□ 2.25
COL1A2P08123 MIR3648-1-201ENST00000615959 180 ntBASIC29.1■■■□□ 2.25
COL1A2P08123 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
COL1A2P08123 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
COL1A2P08123 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.08■■■□□ 2.25
COL1A2P08123 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.08■■■□□ 2.25
COL1A2P08123 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.08■■■□□ 2.25
COL1A2P08123 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.08■■■□□ 2.25
COL1A2P08123 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.07■■■□□ 2.24
COL1A2P08123 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
COL1A2P08123 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL1A2P08123 CR559946.2-201ENST00000623684 991 ntBASIC29.06■■■□□ 2.24
COL1A2P08123 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
COL1A2P08123 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL1A2P08123 MIR639-201ENST00000384974 98 ntBASIC29.05■■■□□ 2.24
COL1A2P08123 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL1A2P08123 AC016575.1-201ENST00000607026 382 ntBASIC29.03■■■□□ 2.24
COL1A2P08123 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL1A2P08123 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL1A2P08123 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
COL1A2P08123 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
COL1A2P08123 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
COL1A2P08123 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.01■■■□□ 2.24
COL1A2P08123 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
COL1A2P08123 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
COL1A2P08123 LINC00273-201ENST00000539813 1452 ntBASIC29.01■■■□□ 2.23
COL1A2P08123 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.99■■■□□ 2.23
COL1A2P08123 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L13-201ENST00000554103 1267 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.99■■■□□ 2.23
COL1A2P08123 MIR4449-201ENST00000578365 66 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L15-201ENST00000611059 1267 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L23-201ENST00000615195 1269 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L24-201ENST00000617576 1269 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L22-201ENST00000618238 1269 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L20-201ENST00000619712 1269 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L21-201ENST00000622058 1269 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L10-201ENST00000622460 1267 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 DUX4L25-201ENST00000624915 1269 ntBASIC28.99■■■□□ 2.23
COL1A2P08123 AL135925.1-201ENST00000605920 1701 ntBASIC28.98■■■□□ 2.23
COL1A2P08123 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
COL1A2P08123 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
COL1A2P08123 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
COL1A2P08123 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
COL1A2P08123 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.97■■■□□ 2.23
COL1A2P08123 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.96■■■□□ 2.23
COL1A2P08123 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL1A2P08123 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
COL1A2P08123 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL1A2P08123 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms