Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MT-ND3P03897 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.58■■□□□ 1.85
MT-ND3P03897 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MT-ND3P03897 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
MT-ND3P03897 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MT-ND3P03897 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MT-ND3P03897 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MT-ND3P03897 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
MT-ND3P03897 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MT-ND3P03897 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
MT-ND3P03897 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.55■■□□□ 1.84
MT-ND3P03897 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
MT-ND3P03897 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
MT-ND3P03897 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
MT-ND3P03897 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.53■■□□□ 1.84
MT-ND3P03897 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MT-ND3P03897 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
MT-ND3P03897 AC142086.6-201ENST00000621154 1765 ntBASIC26.52■■□□□ 1.84
MT-ND3P03897 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
MT-ND3P03897 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.51■■□□□ 1.83
MT-ND3P03897 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
MT-ND3P03897 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
MT-ND3P03897 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MT-ND3P03897 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MT-ND3P03897 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.5■■□□□ 1.83
MT-ND3P03897 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MT-ND3P03897 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.49■■□□□ 1.83
MT-ND3P03897 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.49■■□□□ 1.83
MT-ND3P03897 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
MT-ND3P03897 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
MT-ND3P03897 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
MT-ND3P03897 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
MT-ND3P03897 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
MT-ND3P03897 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
MT-ND3P03897 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
MT-ND3P03897 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
MT-ND3P03897 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
MT-ND3P03897 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
MT-ND3P03897 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
MT-ND3P03897 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
MT-ND3P03897 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
MT-ND3P03897 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
MT-ND3P03897 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
MT-ND3P03897 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
MT-ND3P03897 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.45■■□□□ 1.82
MT-ND3P03897 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
MT-ND3P03897 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
MT-ND3P03897 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
MT-ND3P03897 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
MT-ND3P03897 AL133380.1-201ENST00000506013 324 ntBASIC26.43■■□□□ 1.82
MT-ND3P03897 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
MT-ND3P03897 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
MT-ND3P03897 CAHM-201ENST00000604200 896 ntBASIC26.42■■□□□ 1.82
MT-ND3P03897 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
MT-ND3P03897 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
MT-ND3P03897 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.42■■□□□ 1.82
MT-ND3P03897 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.41■■□□□ 1.82
MT-ND3P03897 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
MT-ND3P03897 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.4■■□□□ 1.82
MT-ND3P03897 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
MT-ND3P03897 AL139393.2-201ENST00000608721 2025 ntBASIC26.39■■□□□ 1.81
MT-ND3P03897 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
MT-ND3P03897 AL391121.1-201ENST00000607967 1349 ntBASIC26.38■■□□□ 1.81
MT-ND3P03897 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.37■■□□□ 1.81
MT-ND3P03897 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.36■■□□□ 1.81
MT-ND3P03897 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MT-ND3P03897 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.35■■□□□ 1.81
MT-ND3P03897 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MT-ND3P03897 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MT-ND3P03897 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MT-ND3P03897 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
MT-ND3P03897 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MT-ND3P03897 RPS2P35-201ENST00000443417 897 ntBASIC26.34■■□□□ 1.81
MT-ND3P03897 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
MT-ND3P03897 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
MT-ND3P03897 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.33■■□□□ 1.81
MT-ND3P03897 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MT-ND3P03897 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MT-ND3P03897 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MT-ND3P03897 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
MT-ND3P03897 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MT-ND3P03897 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MT-ND3P03897 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MT-ND3P03897 WASH5P-204ENST00000632292 975 ntBASIC26.31■■□□□ 1.8
MT-ND3P03897 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MT-ND3P03897 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
MT-ND3P03897 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MT-ND3P03897 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
MT-ND3P03897 AP006261.1-201ENST00000584783 668 ntBASIC26.29■■□□□ 1.8
MT-ND3P03897 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
MT-ND3P03897 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MT-ND3P03897 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MT-ND3P03897 DRD5P2-201ENST00000421395 2012 ntBASIC26.26■■□□□ 1.79
MT-ND3P03897 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
MT-ND3P03897 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
MT-ND3P03897 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.24■■□□□ 1.79
MT-ND3P03897 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.24■■□□□ 1.79
MT-ND3P03897 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MT-ND3P03897 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.23■■□□□ 1.79
MT-ND3P03897 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms