Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
MT-CO1P00395 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.93■■□□□ 1.9
MT-CO1P00395 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MT-CO1P00395 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
MT-CO1P00395 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
MT-CO1P00395 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
MT-CO1P00395 AC108673.1-201ENST00000510422 1159 ntBASIC26.91■■□□□ 1.9
MT-CO1P00395 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MT-CO1P00395 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.91■■□□□ 1.9
MT-CO1P00395 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.9■■□□□ 1.9
MT-CO1P00395 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MT-CO1P00395 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.9■■□□□ 1.9
MT-CO1P00395 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MT-CO1P00395 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
MT-CO1P00395 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MT-CO1P00395 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
MT-CO1P00395 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
MT-CO1P00395 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
MT-CO1P00395 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
MT-CO1P00395 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.87■■□□□ 1.89
MT-CO1P00395 ABHD17AP4-201ENST00000411545 909 ntBASIC26.87■■□□□ 1.89
MT-CO1P00395 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
MT-CO1P00395 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
MT-CO1P00395 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MT-CO1P00395 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MT-CO1P00395 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.85■■□□□ 1.89
MT-CO1P00395 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.85■■□□□ 1.89
MT-CO1P00395 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.85■■□□□ 1.89
MT-CO1P00395 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
MT-CO1P00395 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.84■■□□□ 1.89
MT-CO1P00395 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
MT-CO1P00395 AC010864.1-201ENST00000609407 1511 ntBASIC26.82■■□□□ 1.88
MT-CO1P00395 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.82■■□□□ 1.88
MT-CO1P00395 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.82■■□□□ 1.88
MT-CO1P00395 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.82■■□□□ 1.88
MT-CO1P00395 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.82■■□□□ 1.88
MT-CO1P00395 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
MT-CO1P00395 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.81■■□□□ 1.88
MT-CO1P00395 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.8■■□□□ 1.88
MT-CO1P00395 AC021231.2-201ENST00000594613 730 ntBASIC26.8■■□□□ 1.88
MT-CO1P00395 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
MT-CO1P00395 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.79■■□□□ 1.88
MT-CO1P00395 DUX4L29-201ENST00000425409 679 ntBASIC26.79■■□□□ 1.88
MT-CO1P00395 AL135925.1-201ENST00000605920 1701 ntBASIC26.79■■□□□ 1.88
MT-CO1P00395 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
MT-CO1P00395 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.78■■□□□ 1.88
MT-CO1P00395 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
MT-CO1P00395 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
MT-CO1P00395 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.76■■□□□ 1.87
MT-CO1P00395 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
MT-CO1P00395 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
MT-CO1P00395 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
MT-CO1P00395 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
MT-CO1P00395 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
MT-CO1P00395 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.74■■□□□ 1.87
MT-CO1P00395 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
MT-CO1P00395 ZNRF2P2-203ENST00000454624 420 ntBASIC26.73■■□□□ 1.87
MT-CO1P00395 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
MT-CO1P00395 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.72■■□□□ 1.87
MT-CO1P00395 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
MT-CO1P00395 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
MT-CO1P00395 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
MT-CO1P00395 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.71■■□□□ 1.87
MT-CO1P00395 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
MT-CO1P00395 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
MT-CO1P00395 MIR7108-201ENST00000614319 87 ntBASIC26.69■■□□□ 1.86
MT-CO1P00395 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
MT-CO1P00395 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
MT-CO1P00395 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.67■■□□□ 1.86
MT-CO1P00395 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.67■■□□□ 1.86
MT-CO1P00395 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
MT-CO1P00395 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
MT-CO1P00395 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
MT-CO1P00395 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
MT-CO1P00395 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MT-CO1P00395 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
MT-CO1P00395 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
MT-CO1P00395 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
MT-CO1P00395 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MT-CO1P00395 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
MT-CO1P00395 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.63■■□□□ 1.85
MT-CO1P00395 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MT-CO1P00395 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
MT-CO1P00395 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-CO1P00395 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-CO1P00395 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
MT-CO1P00395 ABCB10P1-201ENST00000614297 2181 ntBASIC26.61■■□□□ 1.85
MT-CO1P00395 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
MT-CO1P00395 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-CO1P00395 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-CO1P00395 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-CO1P00395 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-CO1P00395 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.6■■□□□ 1.85
MT-CO1P00395 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.6■■□□□ 1.85
MT-CO1P00395 ST7-AS1-201ENST00000456775 1889 ntBASIC26.59■■□□□ 1.85
MT-CO1P00395 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
MT-CO1P00395 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.59■■□□□ 1.85
MT-CO1P00395 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.58■■□□□ 1.85
MT-CO1P00395 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
MT-CO1P00395 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms