Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.94■□□□□ 0.94
CGB1A6NKQ9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CGB1A6NKQ9 CAHM-201ENST00000604200 896 ntBASIC20.94■□□□□ 0.94
CGB1A6NKQ9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CGB1A6NKQ9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.94■□□□□ 0.94
CGB1A6NKQ9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CGB1A6NKQ9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CGB1A6NKQ9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CGB1A6NKQ9 AL391121.1-201ENST00000607967 1349 ntBASIC20.93■□□□□ 0.94
CGB1A6NKQ9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.92■□□□□ 0.94
CGB1A6NKQ9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.91■□□□□ 0.94
CGB1A6NKQ9 AC010864.1-201ENST00000609407 1511 ntBASIC20.91■□□□□ 0.94
CGB1A6NKQ9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CGB1A6NKQ9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CGB1A6NKQ9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CGB1A6NKQ9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CGB1A6NKQ9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CGB1A6NKQ9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CGB1A6NKQ9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CGB1A6NKQ9 AC097358.2-201ENST00000607541 1159 ntBASIC20.88■□□□□ 0.93
CGB1A6NKQ9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CGB1A6NKQ9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.87■□□□□ 0.93
CGB1A6NKQ9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CGB1A6NKQ9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CGB1A6NKQ9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.87■□□□□ 0.93
CGB1A6NKQ9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.87■□□□□ 0.93
CGB1A6NKQ9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CGB1A6NKQ9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CGB1A6NKQ9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CGB1A6NKQ9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CGB1A6NKQ9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CGB1A6NKQ9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.86■□□□□ 0.93
CGB1A6NKQ9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CGB1A6NKQ9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CGB1A6NKQ9 AL139393.2-201ENST00000608721 2025 ntBASIC20.85■□□□□ 0.93
CGB1A6NKQ9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CGB1A6NKQ9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CGB1A6NKQ9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CGB1A6NKQ9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CGB1A6NKQ9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.84■□□□□ 0.93
CGB1A6NKQ9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CGB1A6NKQ9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CGB1A6NKQ9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CGB1A6NKQ9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CGB1A6NKQ9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CGB1A6NKQ9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CGB1A6NKQ9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CGB1A6NKQ9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CGB1A6NKQ9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGB1A6NKQ9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGB1A6NKQ9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.82■□□□□ 0.92
CGB1A6NKQ9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CGB1A6NKQ9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CGB1A6NKQ9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CGB1A6NKQ9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.79■□□□□ 0.92
CGB1A6NKQ9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CGB1A6NKQ9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CGB1A6NKQ9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CGB1A6NKQ9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CGB1A6NKQ9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CGB1A6NKQ9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CGB1A6NKQ9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CGB1A6NKQ9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CGB1A6NKQ9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CGB1A6NKQ9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CGB1A6NKQ9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
CGB1A6NKQ9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.77■□□□□ 0.92
CGB1A6NKQ9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.76■□□□□ 0.91
CGB1A6NKQ9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CGB1A6NKQ9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CGB1A6NKQ9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CGB1A6NKQ9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CGB1A6NKQ9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CGB1A6NKQ9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CGB1A6NKQ9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CGB1A6NKQ9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CGB1A6NKQ9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CGB1A6NKQ9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CGB1A6NKQ9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CGB1A6NKQ9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CGB1A6NKQ9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CGB1A6NKQ9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CGB1A6NKQ9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGB1A6NKQ9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CGB1A6NKQ9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGB1A6NKQ9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGB1A6NKQ9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CGB1A6NKQ9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.7■□□□□ 0.9
CGB1A6NKQ9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CGB1A6NKQ9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.7■□□□□ 0.9
CGB1A6NKQ9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CGB1A6NKQ9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CGB1A6NKQ9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.69■□□□□ 0.9
CGB1A6NKQ9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CGB1A6NKQ9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CGB1A6NKQ9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CGB1A6NKQ9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CGB1A6NKQ9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CGB1A6NKQ9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CGB1A6NKQ9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms