Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCP4L1A6NKN8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCP4L1A6NKN8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCP4L1A6NKN8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCP4L1A6NKN8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCP4L1A6NKN8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.94■□□□□ 0.94
PCP4L1A6NKN8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCP4L1A6NKN8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PCP4L1A6NKN8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.93■□□□□ 0.94
PCP4L1A6NKN8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCP4L1A6NKN8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.93■□□□□ 0.94
PCP4L1A6NKN8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCP4L1A6NKN8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCP4L1A6NKN8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCP4L1A6NKN8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCP4L1A6NKN8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCP4L1A6NKN8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCP4L1A6NKN8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCP4L1A6NKN8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCP4L1A6NKN8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCP4L1A6NKN8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCP4L1A6NKN8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCP4L1A6NKN8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCP4L1A6NKN8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PCP4L1A6NKN8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCP4L1A6NKN8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCP4L1A6NKN8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCP4L1A6NKN8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCP4L1A6NKN8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCP4L1A6NKN8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCP4L1A6NKN8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCP4L1A6NKN8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCP4L1A6NKN8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCP4L1A6NKN8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCP4L1A6NKN8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCP4L1A6NKN8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCP4L1A6NKN8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCP4L1A6NKN8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PCP4L1A6NKN8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.86■□□□□ 0.93
PCP4L1A6NKN8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.85■□□□□ 0.93
PCP4L1A6NKN8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCP4L1A6NKN8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCP4L1A6NKN8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCP4L1A6NKN8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCP4L1A6NKN8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.84■□□□□ 0.93
PCP4L1A6NKN8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCP4L1A6NKN8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCP4L1A6NKN8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCP4L1A6NKN8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCP4L1A6NKN8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCP4L1A6NKN8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCP4L1A6NKN8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCP4L1A6NKN8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCP4L1A6NKN8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCP4L1A6NKN8 AL121749.1-202ENST00000609313 2153 ntBASIC20.8■□□□□ 0.92
PCP4L1A6NKN8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCP4L1A6NKN8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCP4L1A6NKN8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCP4L1A6NKN8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.8■□□□□ 0.92
PCP4L1A6NKN8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCP4L1A6NKN8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCP4L1A6NKN8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCP4L1A6NKN8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCP4L1A6NKN8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCP4L1A6NKN8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCP4L1A6NKN8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCP4L1A6NKN8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCP4L1A6NKN8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCP4L1A6NKN8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCP4L1A6NKN8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.76■□□□□ 0.91
PCP4L1A6NKN8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCP4L1A6NKN8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCP4L1A6NKN8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCP4L1A6NKN8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCP4L1A6NKN8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCP4L1A6NKN8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCP4L1A6NKN8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCP4L1A6NKN8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCP4L1A6NKN8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCP4L1A6NKN8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCP4L1A6NKN8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCP4L1A6NKN8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCP4L1A6NKN8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCP4L1A6NKN8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCP4L1A6NKN8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCP4L1A6NKN8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.72■□□□□ 0.91
PCP4L1A6NKN8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCP4L1A6NKN8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCP4L1A6NKN8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCP4L1A6NKN8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCP4L1A6NKN8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCP4L1A6NKN8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.71■□□□□ 0.91
PCP4L1A6NKN8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCP4L1A6NKN8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCP4L1A6NKN8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCP4L1A6NKN8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCP4L1A6NKN8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCP4L1A6NKN8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCP4L1A6NKN8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCP4L1A6NKN8 AC142086.6-201ENST00000621154 1765 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms