Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-4A0A1B0GX49 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-4A0A1B0GX49 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TRBV6-4A0A1B0GX49 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRBV6-4A0A1B0GX49 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-4A0A1B0GX49 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-4A0A1B0GX49 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV6-4A0A1B0GX49 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRBV6-4A0A1B0GX49 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRBV6-4A0A1B0GX49 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-4A0A1B0GX49 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-4A0A1B0GX49 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRBV6-4A0A1B0GX49 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
TRBV6-4A0A1B0GX49 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.52■□□□□ 0.55
TRBV6-4A0A1B0GX49 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV6-4A0A1B0GX49 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-4A0A1B0GX49 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRBV6-4A0A1B0GX49 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TRBV6-4A0A1B0GX49 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV6-4A0A1B0GX49 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-4A0A1B0GX49 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.49■□□□□ 0.55
TRBV6-4A0A1B0GX49 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.49■□□□□ 0.55
TRBV6-4A0A1B0GX49 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV6-4A0A1B0GX49 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-4A0A1B0GX49 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-4A0A1B0GX49 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV6-4A0A1B0GX49 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-4A0A1B0GX49 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-4A0A1B0GX49 AC139426.1-201ENST00000568218 2529 ntBASIC18.48■□□□□ 0.55
TRBV6-4A0A1B0GX49 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-4A0A1B0GX49 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-4A0A1B0GX49 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
TRBV6-4A0A1B0GX49 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-4A0A1B0GX49 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-4A0A1B0GX49 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-4A0A1B0GX49 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-4A0A1B0GX49 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-4A0A1B0GX49 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-4A0A1B0GX49 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-4A0A1B0GX49 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-4A0A1B0GX49 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-4A0A1B0GX49 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-4A0A1B0GX49 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-4A0A1B0GX49 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRBV6-4A0A1B0GX49 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-4A0A1B0GX49 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-4A0A1B0GX49 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-4A0A1B0GX49 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRBV6-4A0A1B0GX49 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-4A0A1B0GX49 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
TRBV6-4A0A1B0GX49 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-4A0A1B0GX49 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV6-4A0A1B0GX49 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV6-4A0A1B0GX49 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-4A0A1B0GX49 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-4A0A1B0GX49 AL139393.2-201ENST00000608721 2025 ntBASIC18.42■□□□□ 0.54
TRBV6-4A0A1B0GX49 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-4A0A1B0GX49 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.41■□□□□ 0.54
TRBV6-4A0A1B0GX49 MIR762-201ENST00000390236 83 ntBASIC18.4■□□□□ 0.54
TRBV6-4A0A1B0GX49 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV6-4A0A1B0GX49 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-4A0A1B0GX49 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRBV6-4A0A1B0GX49 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.39■□□□□ 0.54
TRBV6-4A0A1B0GX49 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-4A0A1B0GX49 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-4A0A1B0GX49 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV6-4A0A1B0GX49 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV6-4A0A1B0GX49 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV6-4A0A1B0GX49 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRBV6-4A0A1B0GX49 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-4A0A1B0GX49 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-4A0A1B0GX49 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-4A0A1B0GX49 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-4A0A1B0GX49 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV6-4A0A1B0GX49 SUZ12P1-203ENST00000578195 985 ntBASIC18.36■□□□□ 0.53
TRBV6-4A0A1B0GX49 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV6-4A0A1B0GX49 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRBV6-4A0A1B0GX49 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TRBV6-4A0A1B0GX49 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-4A0A1B0GX49 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV6-4A0A1B0GX49 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-4A0A1B0GX49 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-4A0A1B0GX49 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-4A0A1B0GX49 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-4A0A1B0GX49 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.34■□□□□ 0.53
TRBV6-4A0A1B0GX49 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-4A0A1B0GX49 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-4A0A1B0GX49 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV6-4A0A1B0GX49 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV6-4A0A1B0GX49 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-4A0A1B0GX49 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-4A0A1B0GX49 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-4A0A1B0GX49 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-4A0A1B0GX49 AC005559.1-201ENST00000589661 871 ntBASIC18.32■□□□□ 0.52
TRBV6-4A0A1B0GX49 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-4A0A1B0GX49 AP004833.2-201ENST00000532228 1454 ntBASIC18.32■□□□□ 0.52
TRBV6-4A0A1B0GX49 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRBV6-4A0A1B0GX49 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV6-4A0A1B0GX49 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-4A0A1B0GX49 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms