Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TRBV6-1A0A0K0K1D8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-1A0A0K0K1D8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-1A0A0K0K1D8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-1A0A0K0K1D8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-1A0A0K0K1D8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV6-1A0A0K0K1D8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-1A0A0K0K1D8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-1A0A0K0K1D8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-1A0A0K0K1D8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-1A0A0K0K1D8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV6-1A0A0K0K1D8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV6-1A0A0K0K1D8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRBV6-1A0A0K0K1D8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBV6-1A0A0K0K1D8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBV6-1A0A0K0K1D8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRBV6-1A0A0K0K1D8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV6-1A0A0K0K1D8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV6-1A0A0K0K1D8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV6-1A0A0K0K1D8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-1A0A0K0K1D8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-1A0A0K0K1D8 AL031258.1-201ENST00000623562 325 ntBASIC19.66■□□□□ 0.74
TRBV6-1A0A0K0K1D8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-1A0A0K0K1D8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV6-1A0A0K0K1D8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV6-1A0A0K0K1D8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.64■□□□□ 0.74
TRBV6-1A0A0K0K1D8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.64■□□□□ 0.74
TRBV6-1A0A0K0K1D8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRBV6-1A0A0K0K1D8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRBV6-1A0A0K0K1D8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-1A0A0K0K1D8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.64■□□□□ 0.73
TRBV6-1A0A0K0K1D8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV6-1A0A0K0K1D8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRBV6-1A0A0K0K1D8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-1A0A0K0K1D8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRBV6-1A0A0K0K1D8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-1A0A0K0K1D8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-1A0A0K0K1D8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV6-1A0A0K0K1D8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-1A0A0K0K1D8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-1A0A0K0K1D8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV6-1A0A0K0K1D8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 WASH5P-204ENST00000632292 975 ntBASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRBV6-1A0A0K0K1D8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV6-1A0A0K0K1D8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV6-1A0A0K0K1D8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV6-1A0A0K0K1D8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV6-1A0A0K0K1D8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV6-1A0A0K0K1D8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRBV6-1A0A0K0K1D8 BX255925.1-201ENST00000566954 1854 ntBASIC19.58■□□□□ 0.73
TRBV6-1A0A0K0K1D8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-1A0A0K0K1D8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV6-1A0A0K0K1D8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV6-1A0A0K0K1D8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV6-1A0A0K0K1D8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-1A0A0K0K1D8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.57■□□□□ 0.72
TRBV6-1A0A0K0K1D8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-1A0A0K0K1D8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 AC010864.1-201ENST00000609407 1511 ntBASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-1A0A0K0K1D8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV6-1A0A0K0K1D8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV6-1A0A0K0K1D8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-1A0A0K0K1D8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-1A0A0K0K1D8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-1A0A0K0K1D8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-1A0A0K0K1D8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-1A0A0K0K1D8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-1A0A0K0K1D8 AP004833.2-201ENST00000532228 1454 ntBASIC19.54■□□□□ 0.72
TRBV6-1A0A0K0K1D8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV6-1A0A0K0K1D8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV6-1A0A0K0K1D8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV6-1A0A0K0K1D8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV6-1A0A0K0K1D8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
TRBV6-1A0A0K0K1D8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRBV6-1A0A0K0K1D8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-1A0A0K0K1D8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-1A0A0K0K1D8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRBV6-1A0A0K0K1D8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-1A0A0K0K1D8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.5■□□□□ 0.71
TRBV6-1A0A0K0K1D8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-1A0A0K0K1D8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-1A0A0K0K1D8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV6-1A0A0K0K1D8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV6-1A0A0K0K1D8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-1A0A0K0K1D8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-1A0A0K0K1D8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms