Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV12-3A0A0B4J271 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV12-3A0A0B4J271 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV12-3A0A0B4J271 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV12-3A0A0B4J271 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV12-3A0A0B4J271 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV12-3A0A0B4J271 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
TRAV12-3A0A0B4J271 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRAV12-3A0A0B4J271 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRAV12-3A0A0B4J271 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV12-3A0A0B4J271 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRAV12-3A0A0B4J271 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV12-3A0A0B4J271 AC097358.2-201ENST00000607541 1159 ntBASIC19.34■□□□□ 0.69
TRAV12-3A0A0B4J271 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV12-3A0A0B4J271 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.33■□□□□ 0.68
TRAV12-3A0A0B4J271 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TRAV12-3A0A0B4J271 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV12-3A0A0B4J271 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV12-3A0A0B4J271 AL391121.1-201ENST00000607967 1349 ntBASIC19.32■□□□□ 0.68
TRAV12-3A0A0B4J271 AC010864.1-201ENST00000609407 1511 ntBASIC19.32■□□□□ 0.68
TRAV12-3A0A0B4J271 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV12-3A0A0B4J271 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV12-3A0A0B4J271 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV12-3A0A0B4J271 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV12-3A0A0B4J271 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV12-3A0A0B4J271 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV12-3A0A0B4J271 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV12-3A0A0B4J271 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV12-3A0A0B4J271 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV12-3A0A0B4J271 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV12-3A0A0B4J271 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV12-3A0A0B4J271 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV12-3A0A0B4J271 AC136428.2-201ENST00000563187 214 ntBASIC19.3■□□□□ 0.68
TRAV12-3A0A0B4J271 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV12-3A0A0B4J271 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV12-3A0A0B4J271 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV12-3A0A0B4J271 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV12-3A0A0B4J271 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV12-3A0A0B4J271 CAHM-201ENST00000604200 896 ntBASIC19.28■□□□□ 0.68
TRAV12-3A0A0B4J271 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV12-3A0A0B4J271 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV12-3A0A0B4J271 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRAV12-3A0A0B4J271 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV12-3A0A0B4J271 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV12-3A0A0B4J271 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV12-3A0A0B4J271 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV12-3A0A0B4J271 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV12-3A0A0B4J271 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRAV12-3A0A0B4J271 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV12-3A0A0B4J271 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV12-3A0A0B4J271 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV12-3A0A0B4J271 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 AL139393.2-201ENST00000608721 2025 ntBASIC19.25■□□□□ 0.67
TRAV12-3A0A0B4J271 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-3A0A0B4J271 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-3A0A0B4J271 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-3A0A0B4J271 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-3A0A0B4J271 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-3A0A0B4J271 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV12-3A0A0B4J271 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV12-3A0A0B4J271 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV12-3A0A0B4J271 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV12-3A0A0B4J271 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV12-3A0A0B4J271 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV12-3A0A0B4J271 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV12-3A0A0B4J271 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRAV12-3A0A0B4J271 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV12-3A0A0B4J271 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV12-3A0A0B4J271 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAV12-3A0A0B4J271 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.21■□□□□ 0.67
TRAV12-3A0A0B4J271 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV12-3A0A0B4J271 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV12-3A0A0B4J271 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV12-3A0A0B4J271 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV12-3A0A0B4J271 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV12-3A0A0B4J271 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV12-3A0A0B4J271 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV12-3A0A0B4J271 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV12-3A0A0B4J271 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV12-3A0A0B4J271 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV12-3A0A0B4J271 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV12-3A0A0B4J271 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV12-3A0A0B4J271 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV12-3A0A0B4J271 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV12-3A0A0B4J271 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
TRAV12-3A0A0B4J271 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRAV12-3A0A0B4J271 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV12-3A0A0B4J271 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV12-3A0A0B4J271 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRAV12-3A0A0B4J271 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV12-3A0A0B4J271 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV12-3A0A0B4J271 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV12-3A0A0B4J271 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms