Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRAV2A0A0B4J234 AC010864.1-201ENST00000609407 1511 ntBASIC19.76■□□□□ 0.75
TRAV2A0A0B4J234 ST7-AS1-201ENST00000456775 1889 ntBASIC19.75■□□□□ 0.75
TRAV2A0A0B4J234 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV2A0A0B4J234 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV2A0A0B4J234 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TRAV2A0A0B4J234 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV2A0A0B4J234 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRAV2A0A0B4J234 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV2A0A0B4J234 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV2A0A0B4J234 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV2A0A0B4J234 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV2A0A0B4J234 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV2A0A0B4J234 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV2A0A0B4J234 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV2A0A0B4J234 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV2A0A0B4J234 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV2A0A0B4J234 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV2A0A0B4J234 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV2A0A0B4J234 DUX4L28-201ENST00000623687 678 ntBASIC19.71■□□□□ 0.75
TRAV2A0A0B4J234 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRAV2A0A0B4J234 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRAV2A0A0B4J234 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV2A0A0B4J234 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.7■□□□□ 0.74
TRAV2A0A0B4J234 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV2A0A0B4J234 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAV2A0A0B4J234 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV2A0A0B4J234 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV2A0A0B4J234 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV2A0A0B4J234 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV2A0A0B4J234 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV2A0A0B4J234 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV2A0A0B4J234 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV2A0A0B4J234 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV2A0A0B4J234 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TRAV2A0A0B4J234 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAV2A0A0B4J234 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV2A0A0B4J234 AL162393.1-201ENST00000437852 946 ntBASIC19.65■□□□□ 0.74
TRAV2A0A0B4J234 AC108673.1-201ENST00000510422 1159 ntBASIC19.65■□□□□ 0.74
TRAV2A0A0B4J234 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAV2A0A0B4J234 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV2A0A0B4J234 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV2A0A0B4J234 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV2A0A0B4J234 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV2A0A0B4J234 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV2A0A0B4J234 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRAV2A0A0B4J234 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV2A0A0B4J234 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV2A0A0B4J234 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAV2A0A0B4J234 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV2A0A0B4J234 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV2A0A0B4J234 AC087741.3-201ENST00000624270 1347 ntBASIC19.61■□□□□ 0.73
TRAV2A0A0B4J234 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TRAV2A0A0B4J234 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV2A0A0B4J234 AC044849.2-201ENST00000606596 710 ntBASIC19.6■□□□□ 0.73
TRAV2A0A0B4J234 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV2A0A0B4J234 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV2A0A0B4J234 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV2A0A0B4J234 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV2A0A0B4J234 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAV2A0A0B4J234 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV2A0A0B4J234 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV2A0A0B4J234 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV2A0A0B4J234 ABCB10P1-201ENST00000614297 2181 ntBASIC19.57■□□□□ 0.72
TRAV2A0A0B4J234 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRAV2A0A0B4J234 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV2A0A0B4J234 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV2A0A0B4J234 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV2A0A0B4J234 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV2A0A0B4J234 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV2A0A0B4J234 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV2A0A0B4J234 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
TRAV2A0A0B4J234 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV2A0A0B4J234 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAV2A0A0B4J234 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV2A0A0B4J234 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV2A0A0B4J234 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV2A0A0B4J234 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV2A0A0B4J234 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV2A0A0B4J234 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRAV2A0A0B4J234 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV2A0A0B4J234 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV2A0A0B4J234 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV2A0A0B4J234 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV2A0A0B4J234 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV2A0A0B4J234 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV2A0A0B4J234 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV2A0A0B4J234 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV2A0A0B4J234 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV2A0A0B4J234 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV2A0A0B4J234 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRAV2A0A0B4J234 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRAV2A0A0B4J234 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV2A0A0B4J234 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV2A0A0B4J234 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV2A0A0B4J234 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV2A0A0B4J234 MIR6090-201ENST00000622481 60 ntBASIC19.49■□□□□ 0.71
TRAV2A0A0B4J234 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRAV2A0A0B4J234 AP004833.2-201ENST00000532228 1454 ntBASIC19.48■□□□□ 0.71
TRAV2A0A0B4J234 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms