Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.48■■□□□ 1.03
SAA2-SAA4A0A096LPE2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.48■■□□□ 1.03
SAA2-SAA4A0A096LPE2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SAA2-SAA4A0A096LPE2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.48■■□□□ 1.03
SAA2-SAA4A0A096LPE2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SAA2-SAA4A0A096LPE2 AC010864.1-201ENST00000609407 1511 ntBASIC21.47■■□□□ 1.03
SAA2-SAA4A0A096LPE2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SAA2-SAA4A0A096LPE2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SAA2-SAA4A0A096LPE2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SAA2-SAA4A0A096LPE2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SAA2-SAA4A0A096LPE2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SAA2-SAA4A0A096LPE2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SAA2-SAA4A0A096LPE2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.45■■□□□ 1.02
SAA2-SAA4A0A096LPE2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SAA2-SAA4A0A096LPE2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SAA2-SAA4A0A096LPE2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SAA2-SAA4A0A096LPE2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.41■■□□□ 1.02
SAA2-SAA4A0A096LPE2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SAA2-SAA4A0A096LPE2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SAA2-SAA4A0A096LPE2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SAA2-SAA4A0A096LPE2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SAA2-SAA4A0A096LPE2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.4■■□□□ 1.02
SAA2-SAA4A0A096LPE2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.4■■□□□ 1.02
SAA2-SAA4A0A096LPE2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.4■■□□□ 1.02
SAA2-SAA4A0A096LPE2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SAA2-SAA4A0A096LPE2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SAA2-SAA4A0A096LPE2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SAA2-SAA4A0A096LPE2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SAA2-SAA4A0A096LPE2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SAA2-SAA4A0A096LPE2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SAA2-SAA4A0A096LPE2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SAA2-SAA4A0A096LPE2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SAA2-SAA4A0A096LPE2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.37■■□□□ 1.01
SAA2-SAA4A0A096LPE2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SAA2-SAA4A0A096LPE2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SAA2-SAA4A0A096LPE2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SAA2-SAA4A0A096LPE2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.37■■□□□ 1.01
SAA2-SAA4A0A096LPE2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SAA2-SAA4A0A096LPE2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SAA2-SAA4A0A096LPE2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.35■■□□□ 1.01
SAA2-SAA4A0A096LPE2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.35■■□□□ 1.01
SAA2-SAA4A0A096LPE2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAA2-SAA4A0A096LPE2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.34■■□□□ 1.01
SAA2-SAA4A0A096LPE2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAA2-SAA4A0A096LPE2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SAA2-SAA4A0A096LPE2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAA2-SAA4A0A096LPE2 AL139393.2-201ENST00000608721 2025 ntBASIC21.33■■□□□ 1.01
SAA2-SAA4A0A096LPE2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SAA2-SAA4A0A096LPE2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SAA2-SAA4A0A096LPE2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SAA2-SAA4A0A096LPE2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.31■■□□□ 1
SAA2-SAA4A0A096LPE2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SAA2-SAA4A0A096LPE2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SAA2-SAA4A0A096LPE2 SUZ12P1-203ENST00000578195 985 ntBASIC21.31■■□□□ 1
SAA2-SAA4A0A096LPE2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.31■■□□□ 1
SAA2-SAA4A0A096LPE2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SAA2-SAA4A0A096LPE2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.3■■□□□ 1
SAA2-SAA4A0A096LPE2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SAA2-SAA4A0A096LPE2 MIR762-201ENST00000390236 83 ntBASIC21.3■■□□□ 1
SAA2-SAA4A0A096LPE2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SAA2-SAA4A0A096LPE2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SAA2-SAA4A0A096LPE2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
SAA2-SAA4A0A096LPE2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SAA2-SAA4A0A096LPE2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SAA2-SAA4A0A096LPE2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SAA2-SAA4A0A096LPE2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.28■■□□□ 1
SAA2-SAA4A0A096LPE2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.27■■□□□ 1
SAA2-SAA4A0A096LPE2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SAA2-SAA4A0A096LPE2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
SAA2-SAA4A0A096LPE2 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.26■□□□□ 0.99
SAA2-SAA4A0A096LPE2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SAA2-SAA4A0A096LPE2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SAA2-SAA4A0A096LPE2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SAA2-SAA4A0A096LPE2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.24■□□□□ 0.99
SAA2-SAA4A0A096LPE2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.24■□□□□ 0.99
SAA2-SAA4A0A096LPE2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.24■□□□□ 0.99
SAA2-SAA4A0A096LPE2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SAA2-SAA4A0A096LPE2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SAA2-SAA4A0A096LPE2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.24■□□□□ 0.99
SAA2-SAA4A0A096LPE2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SAA2-SAA4A0A096LPE2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SAA2-SAA4A0A096LPE2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SAA2-SAA4A0A096LPE2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SAA2-SAA4A0A096LPE2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SAA2-SAA4A0A096LPE2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SAA2-SAA4A0A096LPE2 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.23■□□□□ 0.99
SAA2-SAA4A0A096LPE2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SAA2-SAA4A0A096LPE2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SAA2-SAA4A0A096LPE2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.22■□□□□ 0.99
SAA2-SAA4A0A096LPE2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SAA2-SAA4A0A096LPE2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SAA2-SAA4A0A096LPE2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SAA2-SAA4A0A096LPE2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SAA2-SAA4A0A096LPE2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SAA2-SAA4A0A096LPE2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SAA2-SAA4A0A096LPE2 AC005559.1-201ENST00000589661 871 ntBASIC21.18■□□□□ 0.98
SAA2-SAA4A0A096LPE2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SAA2-SAA4A0A096LPE2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SAA2-SAA4A0A096LPE2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SAA2-SAA4A0A096LPE2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms