Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV26-1A0A087WT03 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV26-1A0A087WT03 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV26-1A0A087WT03 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV26-1A0A087WT03 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV26-1A0A087WT03 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV26-1A0A087WT03 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV26-1A0A087WT03 AL162393.1-201ENST00000437852 946 ntBASIC18.67■□□□□ 0.58
TRAV26-1A0A087WT03 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV26-1A0A087WT03 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV26-1A0A087WT03 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV26-1A0A087WT03 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV26-1A0A087WT03 DUX4L28-201ENST00000623687 678 ntBASIC18.66■□□□□ 0.58
TRAV26-1A0A087WT03 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV26-1A0A087WT03 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRAV26-1A0A087WT03 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
TRAV26-1A0A087WT03 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV26-1A0A087WT03 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV26-1A0A087WT03 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV26-1A0A087WT03 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV26-1A0A087WT03 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV26-1A0A087WT03 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV26-1A0A087WT03 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV26-1A0A087WT03 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV26-1A0A087WT03 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV26-1A0A087WT03 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV26-1A0A087WT03 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV26-1A0A087WT03 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV26-1A0A087WT03 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV26-1A0A087WT03 RPS2P35-201ENST00000443417 897 ntBASIC18.62■□□□□ 0.57
TRAV26-1A0A087WT03 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV26-1A0A087WT03 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV26-1A0A087WT03 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV26-1A0A087WT03 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV26-1A0A087WT03 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV26-1A0A087WT03 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV26-1A0A087WT03 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV26-1A0A087WT03 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV26-1A0A087WT03 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRAV26-1A0A087WT03 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV26-1A0A087WT03 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TRAV26-1A0A087WT03 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV26-1A0A087WT03 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV26-1A0A087WT03 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV26-1A0A087WT03 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV26-1A0A087WT03 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV26-1A0A087WT03 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV26-1A0A087WT03 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV26-1A0A087WT03 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV26-1A0A087WT03 AC087741.3-201ENST00000624270 1347 ntBASIC18.56■□□□□ 0.56
TRAV26-1A0A087WT03 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV26-1A0A087WT03 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV26-1A0A087WT03 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAV26-1A0A087WT03 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV26-1A0A087WT03 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV26-1A0A087WT03 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV26-1A0A087WT03 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV26-1A0A087WT03 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV26-1A0A087WT03 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV26-1A0A087WT03 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV26-1A0A087WT03 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRAV26-1A0A087WT03 AC044849.2-201ENST00000606596 710 ntBASIC18.53■□□□□ 0.56
TRAV26-1A0A087WT03 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV26-1A0A087WT03 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV26-1A0A087WT03 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAV26-1A0A087WT03 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV26-1A0A087WT03 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV26-1A0A087WT03 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV26-1A0A087WT03 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV26-1A0A087WT03 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV26-1A0A087WT03 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV26-1A0A087WT03 AL135925.1-201ENST00000605920 1701 ntBASIC18.5■□□□□ 0.55
TRAV26-1A0A087WT03 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV26-1A0A087WT03 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV26-1A0A087WT03 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV26-1A0A087WT03 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV26-1A0A087WT03 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TRAV26-1A0A087WT03 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV26-1A0A087WT03 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV26-1A0A087WT03 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV26-1A0A087WT03 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV26-1A0A087WT03 AC010864.1-201ENST00000609407 1511 ntBASIC18.48■□□□□ 0.55
TRAV26-1A0A087WT03 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRAV26-1A0A087WT03 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV26-1A0A087WT03 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TRAV26-1A0A087WT03 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV26-1A0A087WT03 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV26-1A0A087WT03 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV26-1A0A087WT03 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV26-1A0A087WT03 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV26-1A0A087WT03 AC108673.1-201ENST00000510422 1159 ntBASIC18.46■□□□□ 0.55
TRAV26-1A0A087WT03 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms