Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.181e-8■■□□□ 14
PRPF8Q6P2Q9 RBM39-207ENST00000412738 1018 ntTSL 311.74□□□□□ -0.536e-11■■□□□ 14
PRPF8Q6P2Q9 ARHGEF1-216ENST00000598587 359 ntTSL 210.17□□□□□ -0.782e-7■■□□□ 14
PRPF8Q6P2Q9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.861e-18■■□□□ 14
PRPF8Q6P2Q9 SBNO2-206ENST00000587673 1209 ntTSL 520.01■□□□□ 0.791e-6■■□□□ 14
PRPF8Q6P2Q9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.753e-12■■□□□ 14
PRPF8Q6P2Q9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.723e-12■■□□□ 14
PRPF8Q6P2Q9 TMUB1-206ENST00000488752 584 ntTSL 219.04■□□□□ 0.643e-12■■□□□ 14
PRPF8Q6P2Q9 GDPD5-213ENST00000532435 825 ntTSL 519.01■□□□□ 0.631e-25■■□□□ 14
PRPF8Q6P2Q9 LMAN2-207ENST00000514458 616 ntTSL 517.95■□□□□ 0.461e-18■■□□□ 14
PRPF8Q6P2Q9 TBL3-203ENST00000564171 917 ntTSL 217.71■□□□□ 0.433e-12■■□□□ 14
PRPF8Q6P2Q9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.271e-18■■□□□ 14
PRPF8Q6P2Q9 EML2-208ENST00000586902 557 ntTSL 416.52■□□□□ 0.231e-6■■□□□ 14
PRPF8Q6P2Q9 TCF3-206ENST00000585855 1170 ntTSL 316.48■□□□□ 0.237e-9■■□□□ 14
PRPF8Q6P2Q9 TCF3-213ENST00000590436 1149 ntTSL 516.48■□□□□ 0.237e-9■■□□□ 14
PRPF8Q6P2Q9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.27■□□□□ 0.21e-6■■□□□ 14
PRPF8Q6P2Q9 ANKRD13D-208ENST00000507915 1165 ntTSL 316.13■□□□□ 0.173e-12■■□□□ 14
PRPF8Q6P2Q9 TCF3-216ENST00000592395 996 ntTSL 515.67■□□□□ 0.17e-9■■□□□ 14
PRPF8Q6P2Q9 ZSWIM8-206ENST00000446546 1025 nt15.53■□□□□ 0.083e-10■■□□□ 14
PRPF8Q6P2Q9 NAPRT-210ENST00000491904 641 ntTSL 315.51■□□□□ 0.078e-7■■□□□ 14
PRPF8Q6P2Q9 NAPRT-208ENST00000480946 1199 ntTSL 515.51■□□□□ 0.074e-7■■□□□ 14
PRPF8Q6P2Q9 TCF3-207ENST00000586164 409 ntTSL 315.39■□□□□ 0.057e-9■■□□□ 14
PRPF8Q6P2Q9 ANKRD13D-206ENST00000506119 609 ntTSL 315.33■□□□□ 0.053e-12■■□□□ 14
PRPF8Q6P2Q9 GDPD5-208ENST00000529095 1201 ntTSL 1 (best)15.18■□□□□ 0.021e-25■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.1■□□□□ 0.012e-7■■□□□ 14
PRPF8Q6P2Q9 LMAN2-204ENST00000504071 562 ntTSL 215.05■□□□□ 01e-18■■□□□ 14
PRPF8Q6P2Q9 NAPRT-206ENST00000462059 722 ntTSL 214.87□□□□□ -0.038e-7■■□□□ 14
PRPF8Q6P2Q9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.033e-9■■□□□ 14
PRPF8Q6P2Q9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.063e-12■■□□□ 14
PRPF8Q6P2Q9 SBNO2-203ENST00000586109 465 ntTSL 314.61□□□□□ -0.071e-6■■□□□ 14
PRPF8Q6P2Q9 MTERF2-204ENST00000548101 715 ntTSL 314.56□□□□□ -0.083e-9■■□□□ 14
PRPF8Q6P2Q9 MTERF2-205ENST00000550496 418 ntTSL 314.53□□□□□ -0.083e-9■■□□□ 14
PRPF8Q6P2Q9 BTBD2-210ENST00000592895 2763 ntTSL 214.52□□□□□ -0.084e-12■■□□□ 14
PRPF8Q6P2Q9 KLHDC4-225ENST00000569487 2072 ntTSL 214.44□□□□□ -0.16e-8■■□□□ 14
PRPF8Q6P2Q9 BTBD2-207ENST00000589685 2422 ntTSL 1 (best)14.15□□□□□ -0.147e-7■■□□□ 14
PRPF8Q6P2Q9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14□□□□□ -0.173e-7■■□□□ 14
PRPF8Q6P2Q9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.173e-9■■□□□ 14
PRPF8Q6P2Q9 STX3-205ENST00000530498 690 ntTSL 213.85□□□□□ -0.191e-6■■□□□ 14
PRPF8Q6P2Q9 TCF3-215ENST00000590684 1313 ntTSL 313.82□□□□□ -0.27e-9■■□□□ 14
PRPF8Q6P2Q9 EML2-224ENST00000590580 539 ntTSL 213.38□□□□□ -0.271e-6■■□□□ 14
PRPF8Q6P2Q9 BTBD2-209ENST00000592082 349 ntTSL 513.23□□□□□ -0.291e-8■■□□□ 14
PRPF8Q6P2Q9 TCF3-211ENST00000587425 629 ntTSL 213.19□□□□□ -0.37e-9■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.1□□□□□ -0.312e-7■■□□□ 14
PRPF8Q6P2Q9 TCF3-217ENST00000592628 1751 ntTSL 512.67□□□□□ -0.387e-9■■□□□ 14
PRPF8Q6P2Q9 KLHDC4-223ENST00000568499 445 ntTSL 312.25□□□□□ -0.452e-8■■□□□ 14
PRPF8Q6P2Q9 SLC26A6-218ENST00000482282 1029 ntTSL 512.17□□□□□ -0.463e-7■■□□□ 14
PRPF8Q6P2Q9 TCF3-205ENST00000585731 1222 ntTSL 212.17□□□□□ -0.467e-9■■□□□ 14
PRPF8Q6P2Q9 TCF3-218ENST00000593064 2694 ntTSL 211.72□□□□□ -0.537e-9■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.25□□□□□ -0.612e-7■■□□□ 14
PRPF8Q6P2Q9 DNHD1-220ENST00000534210 2867 ntTSL 1 (best)11.1□□□□□ -0.631e-6■■□□□ 14
PRPF8Q6P2Q9 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.713e-9■■□□□ 14
PRPF8Q6P2Q9 MTERF2-203ENST00000547115 749 ntTSL 310.46□□□□□ -0.743e-9■■□□□ 14
PRPF8Q6P2Q9 GSTP1-203ENST00000467591 736 ntTSL 29.99□□□□□ -0.811e-8■■□□□ 14
PRPF8Q6P2Q9 SLC26A6-210ENST00000431213 556 ntTSL 49.72□□□□□ -0.855e-7■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.922e-7■■□□□ 14
PRPF8Q6P2Q9 DNHD1-216ENST00000532027 4881 ntTSL 29.31□□□□□ -0.921e-6■■□□□ 14
PRPF8Q6P2Q9 TMUB1-207ENST00000492838 550 ntTSL 59.22□□□□□ -0.933e-12■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.012e-7■■□□□ 14
PRPF8Q6P2Q9 CAPN2-210ENST00000492565 331 ntTSL 58.4□□□□□ -1.061e-6■■□□□ 14
PRPF8Q6P2Q9 GSTP1-207ENST00000498765 723 ntTSL 38.06□□□□□ -1.121e-8■■□□□ 14
PRPF8Q6P2Q9 PABPC1-202ENST00000517403 560 ntTSL 57.45□□□□□ -1.222e-7■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.252e-7■■□□□ 14
PRPF8Q6P2Q9 GPATCH4-207ENST00000494414 740 ntTSL 57.17□□□□□ -1.267e-7■■□□□ 14
PRPF8Q6P2Q9 KLHDC4-220ENST00000568338 584 ntTSL 47.13□□□□□ -1.271e-8■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC6.77□□□□□ -1.332e-7■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.352e-7■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.352e-7■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC5.24□□□□□ -1.572e-7■■□□□ 14
PRPF8Q6P2Q9 PDE4DIP-210ENST00000467859 1396 ntTSL 54.82□□□□□ -1.641e-6■■□□□ 14
PRPF8Q6P2Q9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.53□□□□□ -1.681e-6■■□□□ 14
PRPF8Q6P2Q9 HEATR1-205ENST00000490339 453 ntTSL 30.42□□□□□ -2.341e-6■■□□□ 14
PRPF8Q6P2Q9 SPG11-222ENST00000560435 413 ntTSL 5-0.3□□□□□ -2.461e-6■■□□□ 14
PRPF8Q6P2Q9 MRPL28-207ENST00000461550 1478 ntTSL 514.97□□□□□ -0.012e-7■■□□□ 14
PRPF8Q6P2Q9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.46□□□□□ -0.18e-15■■□□□ 14
PRPF8Q6P2Q9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.338e-15■■□□□ 14
PRPF8Q6P2Q9 DHX38-206ENST00000564622 390 ntTSL 211.84□□□□□ -0.512e-6■■□□□ 14
PRPF8Q6P2Q9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.01□□□□□ -0.012e-7■■□□□ 14
PRPF8Q6P2Q9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.17□□□□□ -0.142e-7■■□□□ 14
PRPF8Q6P2Q9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.272e-7■■□□□ 14
PRPF8Q6P2Q9 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.632e-7■■□□□ 14
PRPF8Q6P2Q9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.192e-6■■□□□ 14
PRPF8Q6P2Q9 SMIM13-201ENST00000376935 1251 ntTSL 53.01□□□□□ -1.932e-6■■□□□ 14
PRPF8Q6P2Q9 ILF3-216ENST00000589600 839 ntTSL 520.69■□□□□ 0.94e-11■■□□□ 14
PRPF8Q6P2Q9 HDLBP-241ENST00000487169 4339 ntTSL 211.89□□□□□ -0.519e-9■■□□□ 14
PRPF8Q6P2Q9 CDK10-207ENST00000504473 910 ntTSL 316.03■□□□□ 0.165e-9■■□□□ 14
PRPF8Q6P2Q9 KAT6A-205ENST00000426524 588 ntTSL 215.43■□□□□ 0.063e-6■■□□□ 14
PRPF8Q6P2Q9 CERCAM-207ENST00000463535 1205 ntTSL 1 (best)14.54□□□□□ -0.083e-6■■□□□ 14
PRPF8Q6P2Q9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.153e-6■■□□□ 14
PRPF8Q6P2Q9 CERCAM-211ENST00000487001 553 ntTSL 59.37□□□□□ -0.913e-6■■□□□ 14
PRPF8Q6P2Q9 CERCAM-210ENST00000483893 587 ntTSL 47.87□□□□□ -1.153e-6■■□□□ 14
PRPF8Q6P2Q9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.95■□□□□ 0.34e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-208ENST00000566401 522 ntTSL 316.95■□□□□ 0.34e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-205ENST00000565110 575 ntTSL 516.42■□□□□ 0.224e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-206ENST00000565479 865 ntTSL 516.1■□□□□ 0.174e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-210ENST00000568674 371 ntTSL 216.05■□□□□ 0.164e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.154e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.49■□□□□ 0.074e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.074e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.014e-13■■□□□ 14
PRPF8Q6P2Q9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.45□□□□□ -0.264e-13■■□□□ 14
Retrieved 100 of 73,762 protein–RNA pairs in 1523.2 ms