RNA–Protein interactions for RNA: ENST00000376935.4

SMIM13-201, Transcript of small integral membrane protein 13, humanhuman

TSL 5

Gene SMIM13, Length 1,251 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-201ENST00000376935 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
SMIM13-201ENST00000376935 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
SMIM13-201ENST00000376935 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
SMIM13-201ENST00000376935 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
SMIM13-201ENST00000376935 FOXD1Q16676 465 aa20.04■□□□□ 0.8
SMIM13-201ENST00000376935 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
SMIM13-201ENST00000376935 MSH5O43196 834 aa18.9■□□□□ 0.62
SMIM13-201ENST00000376935 PIAS4Q8N2W9 510 aaPredicted RBP18.42■□□□□ 0.54
SMIM13-201ENST00000376935 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
SMIM13-201ENST00000376935 ADRA2BP18089 450 aa18.01■□□□□ 0.47
SMIM13-201ENST00000376935 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
SMIM13-201ENST00000376935 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
SMIM13-201ENST00000376935 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
SMIM13-201ENST00000376935 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
SMIM13-201ENST00000376935 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
SMIM13-201ENST00000376935 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
SMIM13-201ENST00000376935 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
SMIM13-201ENST00000376935 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
SMIM13-201ENST00000376935 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
SMIM13-201ENST00000376935 PPP4R3CPQ6ZMV5 832 aa15.56■□□□□ 0.08
SMIM13-201ENST00000376935 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
SMIM13-201ENST00000376935 POTEHQ6S545 545 aa15.43■□□□□ 0.06
SMIM13-201ENST00000376935 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
SMIM13-201ENST00000376935 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
SMIM13-201ENST00000376935 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
SMIM13-201ENST00000376935 KCNA4P22459 653 aa15.21■□□□□ 0.03
SMIM13-201ENST00000376935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
SMIM13-201ENST00000376935 DSG3P32926 999 aa14.87□□□□□ -0.03
SMIM13-201ENST00000376935 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
SMIM13-201ENST00000376935 SPINK5Q9NQ38 1064 aaPredicted RBP14.78□□□□□ -0.04
SMIM13-201ENST00000376935 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
SMIM13-201ENST00000376935 CAPN15O75808 1086 aa14.65□□□□□ -0.06
SMIM13-201ENST00000376935 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
SMIM13-201ENST00000376935 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
SMIM13-201ENST00000376935 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
SMIM13-201ENST00000376935 ABCB7O75027 752 aa14.32□□□□□ -0.12
SMIM13-201ENST00000376935 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
SMIM13-201ENST00000376935 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
SMIM13-201ENST00000376935 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
SMIM13-201ENST00000376935 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
SMIM13-201ENST00000376935 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
SMIM13-201ENST00000376935 SP7Q8TDD2 431 aaPredicted RBP14.07□□□□□ -0.16
SMIM13-201ENST00000376935 ZBTB22O15209 634 aa14.05□□□□□ -0.16
SMIM13-201ENST00000376935 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
SMIM13-201ENST00000376935 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
SMIM13-201ENST00000376935 APLP2Q06481 763 aa13.96□□□□□ -0.17
SMIM13-201ENST00000376935 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
SMIM13-201ENST00000376935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
SMIM13-201ENST00000376935 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
SMIM13-201ENST00000376935 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
SMIM13-201ENST00000376935 POLA2Q14181 598 aa13.71□□□□□ -0.21
SMIM13-201ENST00000376935 PIP4P2Q8N4L2 257 aa13.7□□□□□ -0.22
SMIM13-201ENST00000376935 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
SMIM13-201ENST00000376935 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
SMIM13-201ENST00000376935 HAX1O00165 279 aa13.57□□□□□ -0.24
SMIM13-201ENST00000376935 EVX2Q03828 476 aa13.55□□□□□ -0.24
SMIM13-201ENST00000376935 REM2Q8IYK8 340 aaPredicted RBP13.55□□□□□ -0.24
SMIM13-201ENST00000376935 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMIM13-201ENST00000376935 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
SMIM13-201ENST00000376935 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
SMIM13-201ENST00000376935 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
SMIM13-201ENST00000376935 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
SMIM13-201ENST00000376935 FKBP8Q14318 412 aa13.27□□□□□ -0.29
SMIM13-201ENST00000376935 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
SMIM13-201ENST00000376935 LHX8Q68G74 356 aa13.18□□□□□ -0.3
SMIM13-201ENST00000376935 C19orf67A6NJJ6 358 aa13.08□□□□□ -0.32
SMIM13-201ENST00000376935 GABBR2O75899 941 aa13.08□□□□□ -0.32
SMIM13-201ENST00000376935 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
SMIM13-201ENST00000376935 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
SMIM13-201ENST00000376935 PLSCR2Q9NRY7 297 aa12.96□□□□□ -0.33
SMIM13-201ENST00000376935 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
SMIM13-201ENST00000376935 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
SMIM13-201ENST00000376935 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
SMIM13-201ENST00000376935 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
SMIM13-201ENST00000376935 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
SMIM13-201ENST00000376935 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
SMIM13-201ENST00000376935 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
SMIM13-201ENST00000376935 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
SMIM13-201ENST00000376935 PRKCSHP14314 528 aaPredicted RBP12.67□□□□□ -0.38
SMIM13-201ENST00000376935 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
SMIM13-201ENST00000376935 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
SMIM13-201ENST00000376935 BCANQ96GW7 911 aa12.63□□□□□ -0.39
SMIM13-201ENST00000376935 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
SMIM13-201ENST00000376935 FBLN2P98095 1184 aa12.58□□□□□ -0.4
SMIM13-201ENST00000376935 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
SMIM13-201ENST00000376935 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
SMIM13-201ENST00000376935 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
SMIM13-201ENST00000376935 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
SMIM13-201ENST00000376935 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
SMIM13-201ENST00000376935 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
SMIM13-201ENST00000376935 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
SMIM13-201ENST00000376935 POTEMA6NI47 508 aa12.46□□□□□ -0.41
SMIM13-201ENST00000376935 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
SMIM13-201ENST00000376935 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
SMIM13-201ENST00000376935 CLCN6P51797 869 aa12.43□□□□□ -0.42
SMIM13-201ENST00000376935 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
SMIM13-201ENST00000376935 POTEGQ6S5H5 508 aa12.4□□□□□ -0.42
SMIM13-201ENST00000376935 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMIM13-201ENST00000376935 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
SMIM13-201ENST00000376935 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms