RNA–Protein interactions for RNA: ENST00000467859.3

PDE4DIP-210, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 1,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-210ENST00000467859 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
PDE4DIP-210ENST00000467859 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.45
PDE4DIP-210ENST00000467859 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
PDE4DIP-210ENST00000467859 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
PDE4DIP-210ENST00000467859 FOXD1Q16676 465 aa15.02■□□□□ -0
PDE4DIP-210ENST00000467859 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
PDE4DIP-210ENST00000467859 MSH5O43196 834 aa14.16□□□□□ -0.14
PDE4DIP-210ENST00000467859 PIAS4Q8N2W9 510 aaPredicted RBP14.02□□□□□ -0.17
PDE4DIP-210ENST00000467859 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
PDE4DIP-210ENST00000467859 PPP6R1Q9UPN7 881 aa13.94□□□□□ -0.18
PDE4DIP-210ENST00000467859 ADRA2BP18089 450 aa13.89□□□□□ -0.19
PDE4DIP-210ENST00000467859 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
PDE4DIP-210ENST00000467859 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
PDE4DIP-210ENST00000467859 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
PDE4DIP-210ENST00000467859 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
PDE4DIP-210ENST00000467859 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
PDE4DIP-210ENST00000467859 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
PDE4DIP-210ENST00000467859 ABCC9O60706 1549 aa12.65□□□□□ -0.38
PDE4DIP-210ENST00000467859 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
PDE4DIP-210ENST00000467859 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
PDE4DIP-210ENST00000467859 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
PDE4DIP-210ENST00000467859 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
PDE4DIP-210ENST00000467859 DNAJC5BQ9UF47 199 aa12.41□□□□□ -0.42
PDE4DIP-210ENST00000467859 KCNA4P22459 653 aa12.37□□□□□ -0.43
PDE4DIP-210ENST00000467859 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
PDE4DIP-210ENST00000467859 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
PDE4DIP-210ENST00000467859 DCAF8L1A6NGE4 600 aa12.24□□□□□ -0.45
PDE4DIP-210ENST00000467859 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
PDE4DIP-210ENST00000467859 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
PDE4DIP-210ENST00000467859 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
PDE4DIP-210ENST00000467859 CCDC180Q9P1Z9 1646 aa12.16□□□□□ -0.46
PDE4DIP-210ENST00000467859 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
PDE4DIP-210ENST00000467859 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
PDE4DIP-210ENST00000467859 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
PDE4DIP-210ENST00000467859 C1QBPQ07021 282 aaKnown RBP11.9□□□□□ -0.5
PDE4DIP-210ENST00000467859 RB1CC1Q8TDY2 1594 aa11.81□□□□□ -0.52
PDE4DIP-210ENST00000467859 DNAJC5Q9H3Z4 198 aa11.79□□□□□ -0.52
PDE4DIP-210ENST00000467859 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
PDE4DIP-210ENST00000467859 PRKCSHP14314 528 aaPredicted RBP11.76□□□□□ -0.53
PDE4DIP-210ENST00000467859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
PDE4DIP-210ENST00000467859 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDE4DIP-210ENST00000467859 UNC13AQ9UPW8 1703 aa11.65□□□□□ -0.54
PDE4DIP-210ENST00000467859 ARXQ96QS3 562 aa11.62□□□□□ -0.55
PDE4DIP-210ENST00000467859 NACADO15069 1562 aa11.6□□□□□ -0.55
PDE4DIP-210ENST00000467859 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
PDE4DIP-210ENST00000467859 BICRAQ9NZM4 1560 aa11.55□□□□□ -0.56
PDE4DIP-210ENST00000467859 BCANQ96GW7 911 aa11.54□□□□□ -0.56
PDE4DIP-210ENST00000467859 TIMELESSQ9UNS1 1208 aa11.47□□□□□ -0.57
PDE4DIP-210ENST00000467859 CECR2Q9BXF3 1484 aa11.45□□□□□ -0.58
PDE4DIP-210ENST00000467859 CC2D2AQ9P2K1 1620 aa11.44□□□□□ -0.58
PDE4DIP-210ENST00000467859 ZBTB22O15209 634 aa11.43□□□□□ -0.58
PDE4DIP-210ENST00000467859 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
PDE4DIP-210ENST00000467859 PLCB2Q00722 1185 aa11.4□□□□□ -0.59
PDE4DIP-210ENST00000467859 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
PDE4DIP-210ENST00000467859 TULP1O00294 542 aaPredicted RBP11.34□□□□□ -0.59
PDE4DIP-210ENST00000467859 SHROOM4Q9ULL8 1493 aa11.28□□□□□ -0.6
PDE4DIP-210ENST00000467859 CAPN15O75808 1086 aa11.28□□□□□ -0.6
PDE4DIP-210ENST00000467859 DCAF8L2P0C7V8 631 aa11.28□□□□□ -0.6
PDE4DIP-210ENST00000467859 HOMEZQ8IX15 550 aa11.28□□□□□ -0.6
PDE4DIP-210ENST00000467859 EIF4G1Q04637 1599 aaKnown RBP11.27□□□□□ -0.61
PDE4DIP-210ENST00000467859 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
PDE4DIP-210ENST00000467859 MYO15BQ96JP2 1530 aa11.26□□□□□ -0.61
PDE4DIP-210ENST00000467859 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
PDE4DIP-210ENST00000467859 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
PDE4DIP-210ENST00000467859 DSG3P32926 999 aa11.23□□□□□ -0.61
PDE4DIP-210ENST00000467859 RANGAP1P46060 587 aaPredicted RBP11.18□□□□□ -0.62
PDE4DIP-210ENST00000467859 APLP2Q06481 763 aa11.18□□□□□ -0.62
PDE4DIP-210ENST00000467859 CUX2O14529 1486 aa11.16□□□□□ -0.62
PDE4DIP-210ENST00000467859 FKBP8Q14318 412 aa11.16□□□□□ -0.62
PDE4DIP-210ENST00000467859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
PDE4DIP-210ENST00000467859 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
PDE4DIP-210ENST00000467859 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
PDE4DIP-210ENST00000467859 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
PDE4DIP-210ENST00000467859 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
PDE4DIP-210ENST00000467859 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
PDE4DIP-210ENST00000467859 TRHP20396 242 aaPredicted RBP11.06□□□□□ -0.64
PDE4DIP-210ENST00000467859 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
PDE4DIP-210ENST00000467859 SCRIBQ14160 1630 aa11□□□□□ -0.65
PDE4DIP-210ENST00000467859 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
PDE4DIP-210ENST00000467859 ABCB7O75027 752 aa10.97□□□□□ -0.65
PDE4DIP-210ENST00000467859 FOXD4L1Q9NU39 408 aa10.96□□□□□ -0.65
PDE4DIP-210ENST00000467859 ERCC6Q03468 1493 aa10.93□□□□□ -0.66
PDE4DIP-210ENST00000467859 TTBK1Q5TCY1 1321 aaPredicted RBP10.93□□□□□ -0.66
PDE4DIP-210ENST00000467859 POTEHQ6S545 545 aa10.91□□□□□ -0.66
PDE4DIP-210ENST00000467859 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
PDE4DIP-210ENST00000467859 PODXL2Q9NZ53 605 aa10.9□□□□□ -0.66
PDE4DIP-210ENST00000467859 DCAF1Q9Y4B6 1507 aa10.9□□□□□ -0.66
PDE4DIP-210ENST00000467859 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.67
PDE4DIP-210ENST00000467859 TMEM132AQ24JP5 1023 aa10.87□□□□□ -0.67
PDE4DIP-210ENST00000467859 ZCCHC6Q5VYS8 1495 aaKnown RBP10.83□□□□□ -0.68
PDE4DIP-210ENST00000467859 KDM2AQ9Y2K7 1162 aa10.82□□□□□ -0.68
PDE4DIP-210ENST00000467859 C14orf37Q86TY3 774 aa10.8□□□□□ -0.68
PDE4DIP-210ENST00000467859 MYT1Q01538 1121 aa10.78□□□□□ -0.68
PDE4DIP-210ENST00000467859 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
PDE4DIP-210ENST00000467859 THOC2Q8NI27 1593 aaKnown RBP10.77□□□□□ -0.69
PDE4DIP-210ENST00000467859 POLA2Q14181 598 aa10.75□□□□□ -0.69
PDE4DIP-210ENST00000467859 KLHL34Q8N239 644 aa10.75□□□□□ -0.69
PDE4DIP-210ENST00000467859 FBLN2P98095 1184 aa10.73□□□□□ -0.69
PDE4DIP-210ENST00000467859 NESP48681 1621 aa10.72□□□□□ -0.69
PDE4DIP-210ENST00000467859 NCAPD3P42695 1498 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms