Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.642e-6■■□□□ 14.1
PRPF8Q6P2Q9 SERHL2-209ENST00000527167 1712 ntTSL 510.83□□□□□ -0.682e-6■■□□□ 14.1
PRPF8Q6P2Q9 BCORL1-203ENST00000456822 5648 ntTSL 510.78□□□□□ -0.682e-6■■□□□ 14.1
PRPF8Q6P2Q9 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC10.44□□□□□ -0.742e-6■■□□□ 14.1
PRPF8Q6P2Q9 FDPS-217ENST00000492244 673 ntTSL 310.4□□□□□ -0.741e-7■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC10.4□□□□□ -0.752e-6■■□□□ 14.1
PRPF8Q6P2Q9 ACADM-207ENST00000525881 914 ntTSL 29.89□□□□□ -0.832e-6■■□□□ 14.1
PRPF8Q6P2Q9 ICA1-215ENST00000470696 800 ntTSL 59.59□□□□□ -0.872e-6■■□□□ 14.1
PRPF8Q6P2Q9 BCORL1-202ENST00000441294 2221 ntTSL 1 (best)9.56□□□□□ -0.882e-6■■□□□ 14.1
PRPF8Q6P2Q9 NARF-215ENST00000580748 577 ntTSL 59.53□□□□□ -0.881e-17■■□□□ 14.1
PRPF8Q6P2Q9 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.912e-6■■□□□ 14.1
PRPF8Q6P2Q9 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.932e-6■■□□□ 14.1
PRPF8Q6P2Q9 SERHL2-202ENST00000335879 753 ntTSL 1 (best) BASIC9.01□□□□□ -0.972e-6■■□□□ 14.1
PRPF8Q6P2Q9 BAGE2-203ENST00000496773 2598 ntBASIC7.97□□□□□ -1.132e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-210ENST00000540666 1830 ntTSL 27.75□□□□□ -1.172e-6■■□□□ 14.1
PRPF8Q6P2Q9 EGLN3-203ENST00000487915 848 ntTSL 57.46□□□□□ -1.212e-6■■□□□ 14.1
PRPF8Q6P2Q9 MELTF-AS1-203ENST00000424769 356 ntTSL 27.37□□□□□ -1.232e-6■■□□□ 14.1
PRPF8Q6P2Q9 YBX3-209ENST00000540747 548 ntTSL 56.58□□□□□ -1.362e-6■■□□□ 14.1
PRPF8Q6P2Q9 EGLN3-210ENST00000556785 864 ntTSL 26.12□□□□□ -1.432e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.11□□□□□ -1.432e-6■■□□□ 14.1
PRPF8Q6P2Q9 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.472e-6■■□□□ 14.1
PRPF8Q6P2Q9 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.67□□□□□ -1.52e-6■■□□□ 14.1
PRPF8Q6P2Q9 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.23□□□□□ -1.572e-6■■□□□ 14.1
PRPF8Q6P2Q9 UBE2Q2-206ENST00000563966 538 ntTSL 34.44□□□□□ -1.72e-6■■□□□ 14.1
PRPF8Q6P2Q9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.742e-6■■□□□ 14.1
PRPF8Q6P2Q9 MELTF-AS1-204ENST00000437064 306 ntTSL 34□□□□□ -1.772e-6■■□□□ 14.1
PRPF8Q6P2Q9 KDM3A-211ENST00000483866 449 ntTSL 33.61□□□□□ -1.832e-6■■□□□ 14.1
PRPF8Q6P2Q9 SSX2IP-205ENST00000460500 2116 ntTSL 52.8□□□□□ -1.962e-6■■□□□ 14.1
PRPF8Q6P2Q9 OSBPL9-208ENST00000467064 620 ntTSL 32.52□□□□□ -2.012e-6■■□□□ 14.1
PRPF8Q6P2Q9 GPR107-206ENST00000483935 177 ntTSL 51.91□□□□□ -2.12e-6■■□□□ 14.1
PRPF8Q6P2Q9 STXBP5-206ENST00000443556 1477 ntTSL 1 (best)0.35□□□□□ -2.352e-6■■□□□ 14.1
PRPF8Q6P2Q9 SEL1L3-212ENST00000514321 404 ntTSL 3-0.01□□□□□ -2.412e-6■■□□□ 14.1
PRPF8Q6P2Q9 PREB-209ENST00000474802 1283 ntTSL 516.27■□□□□ 0.192e-8■■□□□ 14.1
PRPF8Q6P2Q9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.98□□□□□ -0.499e-7■■□□□ 14.1
PRPF8Q6P2Q9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.549e-7■■□□□ 14.1
PRPF8Q6P2Q9 SEPT9-224ENST00000589246 594 ntTSL 211.9□□□□□ -0.52e-13■■□□□ 14.1
PRPF8Q6P2Q9 AC244636.2-201ENST00000448031 1669 ntBASIC7.47□□□□□ -1.212e-8■■□□□ 14.1
PRPF8Q6P2Q9 RNU6-707P-201ENST00000364647 95 ntBASIC1.95□□□□□ -2.12e-8■■□□□ 14.1
PRPF8Q6P2Q9 MAN1B1-201ENST00000371587 1485 ntTSL 1 (best)9.58□□□□□ -0.883e-10■■□□□ 14.1
PRPF8Q6P2Q9 DDX39B-203ENST00000417023 561 ntTSL 510.9□□□□□ -0.661e-7■■□□□ 14.1
PRPF8Q6P2Q9 GABBR1-207ENST00000467259 1252 ntTSL 220.67■□□□□ 0.93e-7■■□□□ 14.1
PRPF8Q6P2Q9 TCIRG1-208ENST00000529364 868 ntTSL 313.53□□□□□ -0.249e-8■■□□□ 14.1
PRPF8Q6P2Q9 GABBR1-206ENST00000462632 609 ntTSL 412.9□□□□□ -0.343e-7■■□□□ 14.1
PRPF8Q6P2Q9 PLXNB2-206ENST00000434732 253 ntTSL 211.18□□□□□ -0.624e-7■■□□□ 14.1
PRPF8Q6P2Q9 SLC2A1-202ENST00000415851 578 ntTSL 215.32■□□□□ 0.042e-19■■□□□ 14.1
PRPF8Q6P2Q9 PTK7-214ENST00000481946 807 ntTSL 311.4□□□□□ -0.592e-15■■□□□ 14.1
PRPF8Q6P2Q9 ACTB-205ENST00000432588 568 ntTSL 414.01□□□□□ -0.171e-13■■□□□ 14.1
PRPF8Q6P2Q9 WDR59-204ENST00000562331 570 ntTSL 48.72□□□□□ -1.014e-8■■□□□ 14.1
PRPF8Q6P2Q9 ARID4B-207ENST00000462969 273 ntTSL 212.75□□□□□ -0.373e-10■■□□□ 14.1
PRPF8Q6P2Q9 CBFA2T2-208ENST00000491618 865 ntTSL 57.07□□□□□ -1.287e-10■■□□□ 14.1
PRPF8Q6P2Q9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.018e-7■■□□□ 14.1
PRPF8Q6P2Q9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.58e-8■■□□□ 14.1
PRPF8Q6P2Q9 ANKRD11-204ENST00000378332 1982 ntTSL 216.77■□□□□ 0.288e-8■■□□□ 14.1
PRPF8Q6P2Q9 ANKRD11-206ENST00000562275 2762 ntTSL 510.57□□□□□ -0.728e-8■■□□□ 14.1
PRPF8Q6P2Q9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.271e-14■■□□□ 14.1
PRPF8Q6P2Q9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.441e-14■■□□□ 14.1
PRPF8Q6P2Q9 NSUN5-205ENST00000455763 471 ntTSL 413.28□□□□□ -0.285e-7■■□□□ 14.1
PRPF8Q6P2Q9 HNRNPH1-229ENST00000518548 527 ntTSL 22.17□□□□□ -2.065e-14■■□□□ 14.1
PRPF8Q6P2Q9 AP5Z1-205ENST00000490487 917 ntTSL 315.38■□□□□ 0.051e-8■■□□□ 14.1
PRPF8Q6P2Q9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.2■□□□□ 0.027e-16■■□□□ 14.1
PRPF8Q6P2Q9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.064e-6■■□□□ 14.1
PRPF8Q6P2Q9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.144e-6■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-219ENST00000638489 957 ntTSL 1 (best)13.57□□□□□ -0.248e-7■■□□□ 14.1
PRPF8Q6P2Q9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.364e-6■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-205ENST00000432270 832 ntTSL 312.18□□□□□ -0.468e-7■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-245ENST00000639417 880 ntTSL 311.95□□□□□ -0.58e-7■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-239ENST00000639235 961 ntTSL 1 (best)11.54□□□□□ -0.568e-7■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-242ENST00000639286 861 ntTSL 511.35□□□□□ -0.598e-7■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-233ENST00000638953 952 ntTSL 511.06□□□□□ -0.648e-7■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-244ENST00000639382 1193 ntTSL 1 (best)11.06□□□□□ -0.648e-7■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-213ENST00000638353 970 ntTSL 1 (best)10.98□□□□□ -0.658e-7■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-218ENST00000638478 1076 ntTSL 38.45□□□□□ -1.068e-7■■□□□ 14.1
PRPF8Q6P2Q9 PIGT-238ENST00000639194 439 ntTSL 58.32□□□□□ -1.088e-7■■□□□ 14.1
PRPF8Q6P2Q9 CP-203ENST00000460674 2269 ntTSL 1 (best)3.03□□□□□ -1.924e-6■■□□□ 14.1
PRPF8Q6P2Q9 CP-209ENST00000479771 1150 ntTSL 51.98□□□□□ -2.094e-6■■□□□ 14.1
PRPF8Q6P2Q9 HMGB1-208ENST00000490788 425 ntTSL 21.59□□□□□ -2.152e-6■■□□□ 14.1
PRPF8Q6P2Q9 CP-205ENST00000463556 590 ntTSL 20.14□□□□□ -2.394e-6■■□□□ 14.1
PRPF8Q6P2Q9 MVD-208ENST00000563785 888 ntTSL 215.42■□□□□ 0.063e-10■■□□□ 14.1
PRPF8Q6P2Q9 UGDH-211ENST00000515021 861 ntTSL 516.01■□□□□ 0.156e-10■■□□□ 14.1
PRPF8Q6P2Q9 UGDH-210ENST00000514106 568 ntTSL 413.61□□□□□ -0.236e-10■■□□□ 14.1
PRPF8Q6P2Q9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.622e-6■■□□□ 14.1
PRPF8Q6P2Q9 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.622e-6■■□□□ 14.1
PRPF8Q6P2Q9 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC10.5□□□□□ -0.732e-6■■□□□ 14.1
PRPF8Q6P2Q9 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC10.52□□□□□ -0.732e-8■■□□□ 14.1
PRPF8Q6P2Q9 RPS15-213ENST00000617694 338 ntTSL 39.22□□□□□ -0.934e-7■■□□□ 14.1
PRPF8Q6P2Q9 SPG7-213ENST00000566221 734 ntTSL 312.35□□□□□ -0.436e-10■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-205ENST00000553555 1603 ntTSL 1 (best)11.21□□□□□ -0.611e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-208ENST00000554813 654 ntTSL 311.13□□□□□ -0.631e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-211ENST00000555839 952 ntTSL 211.13□□□□□ -0.631e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.641e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-207ENST00000554325 568 ntTSL 510.58□□□□□ -0.721e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-217ENST00000557181 566 ntTSL 310.58□□□□□ -0.721e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-206ENST00000553681 899 ntTSL 310.02□□□□□ -0.811e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-209ENST00000555306 898 ntTSL 59.88□□□□□ -0.831e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-212ENST00000556054 773 ntTSL 39.88□□□□□ -0.831e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-219ENST00000557365 831 ntTSL 39.88□□□□□ -0.831e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-215ENST00000557150 740 ntTSL 39.61□□□□□ -0.871e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-220ENST00000557592 640 ntTSL 59.49□□□□□ -0.891e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-210ENST00000555414 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.911e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-202ENST00000398030 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.931e-7■■□□□ 14.1
Retrieved 100 of 73,762 protein–RNA pairs in 2009.1 ms