RNA–Protein interactions for RNA: ENST00000460500.1

SSX2IP-205, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 2,116 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-205ENST00000460500 AEBP2Q6ZN18 517 aaPredicted RBP15.2■□□□□ 0.02
SSX2IP-205ENST00000460500 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
SSX2IP-205ENST00000460500 SENP3Q9H4L4 574 aaPredicted RBP13.03□□□□□ -0.32
SSX2IP-205ENST00000460500 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
SSX2IP-205ENST00000460500 FOXD1Q16676 465 aa12.18□□□□□ -0.46
SSX2IP-205ENST00000460500 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
SSX2IP-205ENST00000460500 MSH5O43196 834 aa11.54□□□□□ -0.56
SSX2IP-205ENST00000460500 PIAS4Q8N2W9 510 aaPredicted RBP11.29□□□□□ -0.6
SSX2IP-205ENST00000460500 PPP6R1Q9UPN7 881 aa11.13□□□□□ -0.63
SSX2IP-205ENST00000460500 PLPPR3Q6T4P5 718 aa11.12□□□□□ -0.63
SSX2IP-205ENST00000460500 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
SSX2IP-205ENST00000460500 ADRA2BP18089 450 aa11.06□□□□□ -0.64
SSX2IP-205ENST00000460500 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
SSX2IP-205ENST00000460500 MAPK8IP2Q13387 824 aaPredicted RBP10.27□□□□□ -0.77
SSX2IP-205ENST00000460500 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
SSX2IP-205ENST00000460500 EHMT2Q96KQ7 1210 aa10.13□□□□□ -0.79
SSX2IP-205ENST00000460500 DAXXQ9UER7 740 aaPredicted RBP10.13□□□□□ -0.79
SSX2IP-205ENST00000460500 CACNB1Q02641 598 aaPredicted RBP10.1□□□□□ -0.79
SSX2IP-205ENST00000460500 NCBP3Q53F19 620 aaKnown RBP9.91□□□□□ -0.82
SSX2IP-205ENST00000460500 TTBK1Q5TCY1 1321 aaPredicted RBP9.9□□□□□ -0.83
SSX2IP-205ENST00000460500 RTN4Q9NQC3 1192 aaKnown RBP9.88□□□□□ -0.83
SSX2IP-205ENST00000460500 MYT1Q01538 1121 aa9.87□□□□□ -0.83
SSX2IP-205ENST00000460500 DCAF8L1A6NGE4 600 aa9.85□□□□□ -0.83
SSX2IP-205ENST00000460500 RNF39Q9H2S5 420 aa9.81□□□□□ -0.84
SSX2IP-205ENST00000460500 HOXD11P31277 338 aaPredicted RBP9.77□□□□□ -0.84
SSX2IP-205ENST00000460500 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
SSX2IP-205ENST00000460500 AMER1Q5JTC6 1135 aaPredicted RBP9.73□□□□□ -0.85
SSX2IP-205ENST00000460500 APLP2Q06481 763 aa9.7□□□□□ -0.86
SSX2IP-205ENST00000460500 PPP4R3CPQ6ZMV5 832 aa9.7□□□□□ -0.86
SSX2IP-205ENST00000460500 C1QBPQ07021 282 aaKnown RBP9.66□□□□□ -0.86
SSX2IP-205ENST00000460500 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
SSX2IP-205ENST00000460500 CNKSR2Q8WXI2 1034 aa9.61□□□□□ -0.87
SSX2IP-205ENST00000460500 RNF216Q9NWF9 866 aaPredicted RBP9.61□□□□□ -0.87
SSX2IP-205ENST00000460500 PRKCSHP14314 528 aaPredicted RBP9.59□□□□□ -0.87
SSX2IP-205ENST00000460500 ARXQ96QS3 562 aa9.56□□□□□ -0.88
SSX2IP-205ENST00000460500 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
SSX2IP-205ENST00000460500 KCNA4P22459 653 aa9.49□□□□□ -0.89
SSX2IP-205ENST00000460500 CSRNP3Q8WYN3 585 aa9.43□□□□□ -0.9
SSX2IP-205ENST00000460500 TIMELESSQ9UNS1 1208 aa9.37□□□□□ -0.91
SSX2IP-205ENST00000460500 RANGAP1P46060 587 aaPredicted RBP9.3□□□□□ -0.92
SSX2IP-205ENST00000460500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.29□□□□□ -0.921e-7■□□□□ 8.4
SSX2IP-205ENST00000460500 HOMEZQ8IX15 550 aa9.23□□□□□ -0.93
SSX2IP-205ENST00000460500 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
SSX2IP-205ENST00000460500 TULP1O00294 542 aaPredicted RBP9.22□□□□□ -0.93
SSX2IP-205ENST00000460500 POTEHQ6S545 545 aa9.21□□□□□ -0.94
SSX2IP-205ENST00000460500 BCANQ96GW7 911 aa9.13□□□□□ -0.95
SSX2IP-205ENST00000460500 NPM3O75607 178 aaKnown RBP9.09□□□□□ -0.95
SSX2IP-205ENST00000460500 EIF5BO60841 1220 aaKnown RBP9.08□□□□□ -0.96
SSX2IP-205ENST00000460500 DSG3P32926 999 aa9.07□□□□□ -0.96
SSX2IP-205ENST00000460500 U3KPZ7 1027 aaPredicted RBP9.06□□□□□ -0.96
SSX2IP-205ENST00000460500 KLHL34Q8N239 644 aa9.05□□□□□ -0.96
SSX2IP-205ENST00000460500 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
SSX2IP-205ENST00000460500 CAPN15O75808 1086 aa9.03□□□□□ -0.96
SSX2IP-205ENST00000460500 SPINK5Q9NQ38 1064 aaPredicted RBP9.03□□□□□ -0.96
SSX2IP-205ENST00000460500 PODXL2Q9NZ53 605 aa9.01□□□□□ -0.97
SSX2IP-205ENST00000460500 GTF3C3Q9Y5Q9 886 aa8.95□□□□□ -0.98
SSX2IP-205ENST00000460500 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
SSX2IP-205ENST00000460500 SLC4A1APQ9BWU0 796 aaKnown RBP8.92□□□□□ -0.98
SSX2IP-205ENST00000460500 NPM2Q86SE8 214 aaKnown RBP8.83□□□□□ -1
SSX2IP-205ENST00000460500 HAP1P54257 671 aaPredicted RBP8.81□□□□□ -1
SSX2IP-205ENST00000460500 TRHP20396 242 aaPredicted RBP8.8□□□□□ -1
SSX2IP-205ENST00000460500 ABCB7O75027 752 aa8.78□□□□□ -1
SSX2IP-205ENST00000460500 ZNF219Q9P2Y4 722 aaPredicted RBP8.78□□□□□ -1
SSX2IP-205ENST00000460500 SLC4A2P04920 1241 aa8.77□□□□□ -1.01
SSX2IP-205ENST00000460500 FBXO3Q9UK99 471 aa8.75□□□□□ -1.01
SSX2IP-205ENST00000460500 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
SSX2IP-205ENST00000460500 C14orf37Q86TY3 774 aa8.71□□□□□ -1.02
SSX2IP-205ENST00000460500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
SSX2IP-205ENST00000460500 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
SSX2IP-205ENST00000460500 PLEKHG5O94827 1062 aa8.69□□□□□ -1.02
SSX2IP-205ENST00000460500 RBM42Q9BTD8 480 aaKnown RBP8.67□□□□□ -1.02
SSX2IP-205ENST00000460500 VSIG10Q8N0Z9 540 aa8.65□□□□□ -1.02
SSX2IP-205ENST00000460500 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
SSX2IP-205ENST00000460500 CHRDL2Q6WN34 429 aa8.6□□□□□ -1.03
SSX2IP-205ENST00000460500 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
SSX2IP-205ENST00000460500 DCAF8L2P0C7V8 631 aa8.55□□□□□ -1.04
SSX2IP-205ENST00000460500 ZBTB22O15209 634 aa8.54□□□□□ -1.04
SSX2IP-205ENST00000460500 BCL11AQ9H165 835 aa8.51□□□□□ -1.05
SSX2IP-205ENST00000460500 LOC105371045A0A1W2PR82 267 aa8.5□□□□□ -1.05
SSX2IP-205ENST00000460500 POLA2Q14181 598 aa8.5□□□□□ -1.05
SSX2IP-205ENST00000460500 KDM2AQ9Y2K7 1162 aa8.49□□□□□ -1.05
SSX2IP-205ENST00000460500 SUPT5HO00267 1087 aaKnown RBP8.48□□□□□ -1.05
SSX2IP-205ENST00000460500 SP7Q8TDD2 431 aaPredicted RBP8.47□□□□□ -1.05
SSX2IP-205ENST00000460500 HRCP23327 699 aa8.47□□□□□ -1.05
SSX2IP-205ENST00000460500 UBTFP17480 764 aaKnown RBP8.44□□□□□ -1.06
SSX2IP-205ENST00000460500 FKBP8Q14318 412 aa8.43□□□□□ -1.06
SSX2IP-205ENST00000460500 PDIA4P13667 645 aaKnown RBP8.42□□□□□ -1.06
SSX2IP-205ENST00000460500 MYCNP04198 464 aaPredicted RBP8.41□□□□□ -1.06
SSX2IP-205ENST00000460500 AKT1S1Q96B36 256 aa8.4□□□□□ -1.06
SSX2IP-205ENST00000460500 FBLN2P98095 1184 aa8.39□□□□□ -1.07
SSX2IP-205ENST00000460500 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
SSX2IP-205ENST00000460500 CHMP4AQ9BY43 222 aa8.34□□□□□ -1.07
SSX2IP-205ENST00000460500 PIP4P2Q8N4L2 257 aa8.33□□□□□ -1.08
SSX2IP-205ENST00000460500 CDK11AQ9UQ88 783 aaPredicted RBP8.33□□□□□ -1.08
SSX2IP-205ENST00000460500 CDK11BP21127 795 aaKnown RBP8.32□□□□□ -1.08
SSX2IP-205ENST00000460500 REM2Q8IYK8 340 aaPredicted RBP8.32□□□□□ -1.08
SSX2IP-205ENST00000460500 ZBTB12Q9Y330 459 aaPredicted RBP8.3□□□□□ -1.08
SSX2IP-205ENST00000460500 HAX1O00165 279 aa8.27□□□□□ -1.09
SSX2IP-205ENST00000460500 FAM9AQ8IZU1 332 aaPredicted RBP8.27□□□□□ -1.09
SSX2IP-205ENST00000460500 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms