Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 OR10J5-201ENST00000334857 930 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
MTHFRP42898 AL137845.1-201ENST00000340681 1110 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 SNORD3G-201ENST00000362796 215 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 KIF9-203ENST00000425452 640 ntTSL 3 BASIC9.41□□□□□ -0.9
MTHFRP42898 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 RPS28P8-201ENST00000435020 208 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 AC090954.1-201ENST00000445502 361 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 OR2AI1P-201ENST00000448534 932 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 OR5S1P-201ENST00000453063 951 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 RFC3P1-201ENST00000454568 682 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 IAH1-205ENST00000482918 863 ntTSL 3 BASIC9.41□□□□□ -0.9
MTHFRP42898 PDPN-209ENST00000510906 786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 AC139783.1-201ENST00000515618 681 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 LINC00629-202ENST00000592070 844 ntTSL 3 BASIC9.41□□□□□ -0.9
MTHFRP42898 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 AC026150.3-201ENST00000602595 499 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 MIR6751-201ENST00000610479 63 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 MIR7156-201ENST00000620979 60 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 LINC01170-202ENST00000628324 650 ntTSL 2 BASIC9.41□□□□□ -0.9
MTHFRP42898 AL009172.2-201ENST00000638776 717 ntTSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 DOCK2-217ENST00000540750 1753 ntTSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC9.41□□□□□ -0.9
MTHFRP42898 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
MTHFRP42898 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC9.4□□□□□ -0.9
MTHFRP42898 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 RMRP-202ENST00000363046 264 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC9.4□□□□□ -0.9
MTHFRP42898 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
MTHFRP42898 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC9.4□□□□□ -0.9
MTHFRP42898 RPL3P8-201ENST00000432928 1191 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC9.4□□□□□ -0.9
MTHFRP42898 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC9.4□□□□□ -0.9
MTHFRP42898 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC9.4□□□□□ -0.9
MTHFRP42898 AC009997.1-201ENST00000557862 129 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC9.4□□□□□ -0.9
MTHFRP42898 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC9.4□□□□□ -0.9
MTHFRP42898 snoZ6.4-201ENST00000581669 55 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 SNRPCP20-201ENST00000588011 210 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 AL137798.1-201ENST00000607700 339 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 RN7SL796P-201ENST00000613991 291 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 AC027139.2-201ENST00000615639 448 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 GNG2-216ENST00000615906 1294 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
MTHFRP42898 AL355480.4-201ENST00000626823 69 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC9.4□□□□□ -0.9
MTHFRP42898 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC9.4□□□□□ -0.9
MTHFRP42898 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC9.4□□□□□ -0.9
MTHFRP42898 SVILP1-201ENST00000422642 2676 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC9.4□□□□□ -0.9
MTHFRP42898 AC139495.3-201ENST00000515156 4437 ntBASIC9.4□□□□□ -0.9
MTHFRP42898 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MTHFRP42898 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC9.4□□□□□ -0.9
MTHFRP42898 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MTHFRP42898 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
MTHFRP42898 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MTHFRP42898 RGS6-219ENST00000622468 5453 ntTSL 5 BASIC9.4□□□□□ -0.91
MTHFRP42898 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
MTHFRP42898 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MTHFRP42898 KBTBD4-204ENST00000526005 2444 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
MTHFRP42898 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC9.4□□□□□ -0.91
MTHFRP42898 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
MTHFRP42898 FABP7-201ENST00000356535 2086 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
MTHFRP42898 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 MTHFD2P1-203ENST00000494840 2595 ntTSL 2 BASIC9.39□□□□□ -0.91
MTHFRP42898 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 DOCK8-202ENST00000382331 1922 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 RPL4P3-201ENST00000428881 1311 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms