RNA–Protein interactions for RNA: ENST00000283249.6

ITGB6-201, Transcript of integrin subunit beta 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB6, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-201ENST00000283249 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.1
ITGB6-201ENST00000283249 SUPT5HO00267 1087 aaKnown RBP15.35■□□□□ 0.05
ITGB6-201ENST00000283249 NISCHQ9Y2I1 1504 aa15.31■□□□□ 0.04
ITGB6-201ENST00000283249 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
ITGB6-201ENST00000283249 SHROOM4Q9ULL8 1493 aa14.93□□□□□ -0.02
ITGB6-201ENST00000283249 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
ITGB6-201ENST00000283249 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
ITGB6-201ENST00000283249 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
ITGB6-201ENST00000283249 MYT1Q01538 1121 aa14.56□□□□□ -0.08
ITGB6-201ENST00000283249 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
ITGB6-201ENST00000283249 APLP2Q06481 763 aa14.54□□□□□ -0.08
ITGB6-201ENST00000283249 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
ITGB6-201ENST00000283249 CCER1Q8TC90 406 aaPredicted RBP14.32□□□□□ -0.12
ITGB6-201ENST00000283249 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
ITGB6-201ENST00000283249 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
ITGB6-201ENST00000283249 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
ITGB6-201ENST00000283249 HRCP23327 699 aa14.21□□□□□ -0.13
ITGB6-201ENST00000283249 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
ITGB6-201ENST00000283249 NEFLP07196 543 aa14.05□□□□□ -0.16
ITGB6-201ENST00000283249 YTHDC1Q96MU7 727 aaKnown RBP14.01□□□□□ -0.17
ITGB6-201ENST00000283249 UBTFP17480 764 aaKnown RBP14□□□□□ -0.17
ITGB6-201ENST00000283249 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
ITGB6-201ENST00000283249 CHIC1Q5VXU3 224 aa13.89□□□□□ -0.19
ITGB6-201ENST00000283249 PPARGC1BQ86YN6 1023 aaKnown RBP13.84□□□□□ -0.19
ITGB6-201ENST00000283249 LOC105371045A0A1W2PR82 267 aa13.8□□□□□ -0.2
ITGB6-201ENST00000283249 ATP1B4Q9UN42 357 aaPredicted RBP13.79□□□□□ -0.2
ITGB6-201ENST00000283249 DIEXFQ68CQ4 756 aaKnown RBP13.67□□□□□ -0.22
ITGB6-201ENST00000283249 HNRNPUL2Q1KMD3 747 aaKnown RBP13.6□□□□□ -0.23
ITGB6-201ENST00000283249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
ITGB6-201ENST00000283249 DAXXQ9UER7 740 aaPredicted RBP13.55□□□□□ -0.24
ITGB6-201ENST00000283249 ITGAEP38570 1179 aa13.52□□□□□ -0.24
ITGB6-201ENST00000283249 GTF3C3Q9Y5Q9 886 aa13.5□□□□□ -0.25
ITGB6-201ENST00000283249 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
ITGB6-201ENST00000283249 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
ITGB6-201ENST00000283249 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
ITGB6-201ENST00000283249 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
ITGB6-201ENST00000283249 CNGB1Q14028 1251 aaPredicted RBP13.25□□□□□ -0.29
ITGB6-201ENST00000283249 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
ITGB6-201ENST00000283249 BCANQ96GW7 911 aa13.24□□□□□ -0.29
ITGB6-201ENST00000283249 ANP32CO43423 234 aa13.23□□□□□ -0.29
ITGB6-201ENST00000283249 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
ITGB6-201ENST00000283249 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
ITGB6-201ENST00000283249 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
ITGB6-201ENST00000283249 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
ITGB6-201ENST00000283249 TRIM52Q96A61 297 aa13.09□□□□□ -0.31
ITGB6-201ENST00000283249 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.32
ITGB6-201ENST00000283249 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
ITGB6-201ENST00000283249 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
ITGB6-201ENST00000283249 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
ITGB6-201ENST00000283249 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
ITGB6-201ENST00000283249 FKBP8Q14318 412 aa12.97□□□□□ -0.33
ITGB6-201ENST00000283249 ZNF326Q5BKZ1 582 aaKnown RBP12.92□□□□□ -0.34
ITGB6-201ENST00000283249 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
ITGB6-201ENST00000283249 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
ITGB6-201ENST00000283249 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
ITGB6-201ENST00000283249 ABCC9O60706 1549 aa12.83□□□□□ -0.36
ITGB6-201ENST00000283249 MIER1Q8N108 512 aa12.82□□□□□ -0.36
ITGB6-201ENST00000283249 CANXP27824 592 aaKnown RBP12.82□□□□□ -0.36
ITGB6-201ENST00000283249 CCDC180Q9P1Z9 1646 aa12.81□□□□□ -0.36
ITGB6-201ENST00000283249 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
ITGB6-201ENST00000283249 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
ITGB6-201ENST00000283249 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
ITGB6-201ENST00000283249 EIF5BO60841 1220 aaKnown RBP12.79□□□□□ -0.36
ITGB6-201ENST00000283249 P3H3Q8IVL6 736 aa12.75□□□□□ -0.37
ITGB6-201ENST00000283249 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
ITGB6-201ENST00000283249 CCDC136Q96JN2 1154 aa12.74□□□□□ -0.37
ITGB6-201ENST00000283249 FAM9BQ8IZU0 186 aa12.73□□□□□ -0.37
ITGB6-201ENST00000283249 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.37
ITGB6-201ENST00000283249 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
ITGB6-201ENST00000283249 NEFMP07197 916 aa12.7□□□□□ -0.38
ITGB6-201ENST00000283249 GLIPR1L2Q4G1C9 344 aa12.7□□□□□ -0.38
ITGB6-201ENST00000283249 UPF2Q9HAU5 1272 aaKnown RBP12.69□□□□□ -0.38
ITGB6-201ENST00000283249 NBR1Q14596 966 aa12.68□□□□□ -0.38
ITGB6-201ENST00000283249 ANP32EQ9BTT0 268 aa12.68□□□□□ -0.38
ITGB6-201ENST00000283249 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
ITGB6-201ENST00000283249 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
ITGB6-201ENST00000283249 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
ITGB6-201ENST00000283249 HSP90AA1P07900 732 aaKnown RBP12.62□□□□□ -0.39
ITGB6-201ENST00000283249 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
ITGB6-201ENST00000283249 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
ITGB6-201ENST00000283249 CLIP1P30622 1438 aa12.58□□□□□ -0.4
ITGB6-201ENST00000283249 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
ITGB6-201ENST00000283249 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
ITGB6-201ENST00000283249 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
ITGB6-201ENST00000283249 EIF4G2P78344 907 aaKnown RBP eCLIP12.56□□□□□ -0.4
ITGB6-201ENST00000283249 FBLN2P98095 1184 aa12.56□□□□□ -0.4
ITGB6-201ENST00000283249 EEA1Q15075 1411 aa12.55□□□□□ -0.4
ITGB6-201ENST00000283249 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.4
ITGB6-201ENST00000283249 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
ITGB6-201ENST00000283249 CEP162Q5TB80 1403 aa12.52□□□□□ -0.41
ITGB6-201ENST00000283249 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
ITGB6-201ENST00000283249 CHIC2Q9UKJ5 165 aa12.5□□□□□ -0.41
ITGB6-201ENST00000283249 WDR43Q15061 677 aaKnown RBP eCLIP12.49□□□□□ -0.41
ITGB6-201ENST00000283249 SUPT16HQ9Y5B9 1047 aaKnown RBP12.49□□□□□ -0.41
ITGB6-201ENST00000283249 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
ITGB6-201ENST00000283249 MTUS2Q5JR59 1369 aa12.47□□□□□ -0.41
ITGB6-201ENST00000283249 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
ITGB6-201ENST00000283249 PPP4R2Q9NY27 417 aa12.46□□□□□ -0.41
ITGB6-201ENST00000283249 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.41
ITGB6-201ENST00000283249 GOLGA3Q08378 1498 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms